Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq374 161 2e-37 >seq374 Length=747316 Score = 161 bits (178), Expect = 2e-37 Identities = 210/284 (74%), Gaps = 5/284 (2%) Strand=Plus/Minus Query 1 CCCACGCTTTCGCGCCTCAGCGTCAGTTACTGTCC-AGCAATCCGCCTTCGCCACTGGTG 59 ||||||||||| ||||||| |||| ||| ||||| || | |||||| ||| |||||| Sbjct 308294 CCCACGCTTTCAAGCCTCAGTGTCAATTA-TGTCCCAGGTACTCGCCTTAGCCTCTGGTG 308236 Query 60 TTCCTCCGTATATCTACGCATTTCACCGCTACACACGGAATTCCGATTGCCTCTCCAGCA 119 |||||| |||||||||||||| |||||||||||| ||||||| | || || | Sbjct 308235 TTCCTCAATATATCTACGCATTCCACCGCTACACATTGAATTCCAGTACCCCCTAACTAA 308176 Query 120 CTCAAGAAAAACAGTTTCAAATGCAGGCTATGGGTTGAGCCCATAGTTTTCACATCTGAC 179 || ||| || | | || | || || | ||| ||| || |||| ||| || Sbjct 308175 TTCTAGAGAAGCGATATCCATCGC-GGACACCTGTTAAGCAGATGCTTTTGACA-ATGGA 308118 Query 180 TTGCCTTC-CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTA 238 | || | || ||||| | ||||||| |||||||||||||||||| ||| | ||||| Sbjct 308117 TCAACTCCTCCACCTACGCTTCCTTTACGCCCAATAAATCCGGATAATGCTCGTGACCTA 308058 Query 239 CGTATTACCGCGGCTGCTGGCACGTAGTTAGCCGTGGCTTATTC 282 || ||||||| ||||||||||| |||||||| || ||||||| Sbjct 308057 TGTTTTACCGCAGCTGCTGGCACATAGTTAGCTGTCACTTATTC 308014 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 826578174975