Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01002180.1 Length=500 Score E Sequences producing significant alignments: (Bits) Value seq374 196 1e-47 >seq374 Length=747316 Score = 196 bits (216), Expect = 1e-47 Identities = 251/346 (73%), Gaps = 25/346 (7%) Strand=Plus/Plus Query 168 ATTAGCTAGTTGGTAAGGTAACGGCTTACCAAGGCGACGATCAGTAGCCGACCTGAGAGG 227 ||||| ||||||| ||||| ||| |||||| || ||| ||||| || |||||||| Sbjct 307764 ATTAGGTAGTTGGCGGGGTAAAGGCCCACCAAGCCGGTGATGGGTAGCTGAACTGAGAGG 307823 Query 228 GTGATCGGCCACATTGGAACTGAGACACGGTCCAAACTCCTACGGGAGGCAGCAGTGGGG 287 || | ||| || ||| | ||||| | || ||| | |||||||||| ||||||||| || Sbjct 307824 TTGGACAGCCGCAATGGGATTGAGATATGGCCCATATTCCTACGGGAAGCAGCAGTGAGG 307883 Query 288 AATATTGCACAATGGGCAAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTC 347 ||| || |||||||||| ||||||||||| ||||| || ||||| ||||||||| |||| Sbjct 307884 AATTTTTCACAATGGGCGAAAGCCTGATGGAGCAATACCACGTGAACGATGAAGGTCTTC 307943 Query 348 GGGTCGTAAAGCTCTGTCCTCAAGGAA---------GAT----AATGA------CG---- 384 | | |||||| ||| | | ||||| ||| ||||| || Sbjct 307944 TGATTGTAAAGTTCTTTTATTTAGGAAAAAAAGCAGGATAGGAAATGATTCTGCCGTGAT 308003 Query 385 -GTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGG 443 ||||| || ||| | |||||||| ||||||||||| ||||||| || |||| Sbjct 308004 TGTACTAATTGAATAAGTGACAGCTAACTATGTGCCAGCAGCTGCGGTAAAACATAGGTC 308063 Query 444 GCTAGCGTTATCCGGAATTACTGGGGCGTAAAGGGTGCGTAGGTGG 489 | ||| ||||||||| ||| | ||||||||||| |||||||||| Sbjct 308064 ACGAGCATTATCCGGATTTA-TTGGGCGTAAAGGAAGCGTAGGTGG 308108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1493455766400