Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq374 89.7 2e-15 >seq374 Length=747316 Score = 89.7 bits (98), Expect = 2e-15 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 336 CGAGAGGAGAAGAATCCGGACTATCAGCTAAGGCCCCGAAATGACAGCTAAGTTAAACTA 395 || |||| |||| || ||| | | ||||| ||| ||| | |||||||| || | Sbjct 178652 CGTGAGGGAAAGAGCCCAGACCAATAAATAAGGTCCCTAAACTA-AGCTAAGTGGAA--A 178596 Query 396 ACGAAGTCTGATTGCTAAGACAGCTAGGATGTTGGCTTGGAAGCAGCCATTCATTTAAAG 455 | || ||| | | | | ||| ||||||||||||||| |||||||||| | ||||||| Sbjct 178595 AGGAGGTCAAAATTCATAAACAACTAGGATGTTGGCTTAGAAGCAGCCAC-CGTTTAAAG 178537 Query 456 AGTGCGTAACAGCTCACTAGTCGAG 480 ||||||||| |||||||||||| || Sbjct 178536 AGTGCGTAATAGCTCACTAGTCTAG 178512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1684924454400