Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq34 354 3e-95 seq107 313 8e-83 seq43 271 2e-70 seq29 266 1e-68 seq152318 206 9e-51 seq155660 167 8e-39 seq183 167 8e-39 seq62 167 8e-39 seq92 159 1e-36 seq224040 113 1e-22 seq73 91.5 5e-16 seq12 84.2 7e-14 >seq34 Length=12707470 Score = 354 bits (392), Expect = 3e-95 Identities = 247/280 (88%), Gaps = 2/280 (1%) Strand=Plus/Minus Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 ||| |||||||||||||| ||| ||||| | | ||||||| ||||||||||||||| Sbjct 7468828 CTTTTTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAACCAAGCTCAACAGGGT 7468769 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 |||||||||| |||||||| |||||| | ||||||||||||||||||| ||| ||||||| Sbjct 7468768 CTTCTTTCCCTGCTGATTCTGCCAAGTCTGTTCCCTTGGCTGTGGTTTTGCTGGATAGTA 7468709 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 | |||||||||||||| |||| |||||||||||| | |||||||||||||||||||| Sbjct 7468708 GGTAGGGACAGTGGGAGTCTCAC--ATCCATTCATGCACATCACTAATTAGATGACGAGG 7468651 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAAT 482 ||||||||||||||||||||||||||||||||| | ||||||||| |||| |||||| Sbjct 7468650 AATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGACGTTTACCCATGCTTCATTGAAT 7468591 Query 483 TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 ||||||||||||||||||||| |||||||||||||||||| Sbjct 7468590 TTCTTCACTTTGACATTCAGAACACTGGGCAGAAATCACA 7468551 >seq107 Length=6096024 Score = 313 bits (346), Expect = 8e-83 Identities = 187/196 (95%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 || |||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| Sbjct 2203783 TTTTTTCCCCGCTGATTCCACCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGGATAGTAG 2203724 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| Sbjct 2203723 GTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 2203664 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 2203663 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATT 2203604 Query 484 TCTTCACTTTGACATT 499 |||||||| ||| ||| Sbjct 2203603 TCTTCACTCTGAAATT 2203588 >seq43 Length=11871039 Score = 271 bits (300), Expect = 2e-70 Identities = 171/185 (92%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 7943597 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 7943656 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| | Sbjct 7943657 CAGGGTCTTCTTTCCCCGCTGATTCCACCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTGG 7943716 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||| | ||||| ||||||||||||||||||||||| Sbjct 7943717 ATAGTAGGTAGGGACAGTGGGAATCTCGATCATCCACTCATGCGCGTCACTAATTAGATG 7943776 Query 417 ACGAG 421 ||||| Sbjct 7943777 ACGAG 7943781 >seq29 Length=12934336 Score = 266 bits (294), Expect = 1e-68 Identities = 239/298 (80%), Gaps = 8/298 (3%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||| ||| |||| || || ||||| ||| |||| ||||||||||||| Sbjct 4831743 CTCCCACTTAC---ACATCTCTTAAATCTCTTCACTGTGTCAGACTGGAGTCAAGCTCAA 4831799 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 || ||||| ||||||| |||| || || ||||| || ||| ||||||| ||||| || | Sbjct 4831800 CAAGGTCTCATTTCCCCACTGACTCTGCAAAGCCTGT-CCCGTGGCTGTAGTTTCACTGG 4831858 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 | || || |||||||||||||||||| ||| ||||||||||| ||| ||||||||||| Sbjct 4831859 ACAGAAGGTAGGGACAGTGGGAATCTTGTTCATCCATTCATGTATGTCCCTAATTAGATG 4831918 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 || |||||||||| |||| ||||||| | ||||||||| | || |||||| | ||| Sbjct 4831919 ACAAGGCATTTGGGTACCATAAGAGAATGCTAGTTACTCGCACCATTTACCTGTACTTCA 4831978 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACAT 534 ||| ||| |||||||||||||||||||| ||||||||| ||||||| ||||||| Sbjct 4831979 CTGA----CTTGACTTTGACATTCAGAGCACTAGGCAGAAATTACATTGCATCAACAT 4832032 >seq152318 Length=331 Score = 206 bits (228), Expect = 9e-51 Identities = 132/144 (92%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 374 TGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTAC 433 || ||||||||||||||||||||||||||||| || |||| ||||||||||||||||||| Sbjct 188 TGAGAATCTCGTTAATCCATTCATGCGCGTCAGTAGTTAGCTGACGAGGCATTTGGCTAC 247 Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||| | ||||| || | ||| Sbjct 248 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTACTCGAATTACTACGATTT 307 Query 494 GACATTCAGAGCACTGGGCAGAAA 517 ||||||||||||||||||||||| Sbjct 308 AACATTCAGAGCACTGGGCAGAAA 331 >seq155660 Length=328 Score = 167 bits (184), Expect = 8e-39 Identities = 97/100 (97%), Gaps = 0/100 (0%) Strand=Plus/Minus Query 434 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTT 493 ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| Sbjct 328 CTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTT 269 Query 494 GACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||| ||||||||| Sbjct 268 GACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 229 >seq183 Length=3710687 Score = 167 bits (184), Expect = 8e-39 Identities = 124/145 (86%), Gaps = 0/145 (0%) Strand=Plus/Minus Query 235 GGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTC 294 |||| ||| ||||| | ||| |||| ||| ||||| | | |||||||||||||||| Sbjct 3235204 GGCTGCCATTTATTGTGTACCGCTCATGTCTCTTCACTGTGCCAGACTAGAGTCAAGCTC 3235145 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 ||||||||||||||||| |||||||||||||||||| |||||||||||||||||||| || Sbjct 3235144 AACAGGGTCTTCTTTCCTCGCTGATTCCGCCAAGCCAGTTCCCTTGGCTGTGGTTTCACT 3235085 Query 355 AGATAGTAGATAGGGACAGTGGGAA 379 ||| |||| || |||||||||||| Sbjct 3235084 GGATGGTAGGTAAGGACAGTGGGAA 3235060 >seq62 Length=9015797 Score = 167 bits (184), Expect = 8e-39 Identities = 98/102 (96%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 435 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTG 494 |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1891609 TTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCATTGAATTTCTTCACTTTG 1891668 Query 495 ACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATCA 536 ||||||||||||||||||||||||||||| ||||||||| || Sbjct 1891669 ACATTCAGAGCACTGGGCAGAAATCACATGGCGTCAACACCA 1891710 >seq92 Length=6764252 Score = 159 bits (176), Expect = 1e-36 Identities = 212/288 (74%), Gaps = 5/288 (2%) Strand=Plus/Plus Query 237 CTCCCACTTATTC-TACACCTCTCAAGTCATTTCACAAAGTC-GGACTAGAGTCAAGCTC 294 |||||||||| || | ||| || | ||| ||| | | | | || || ||||| | || Sbjct 4187276 CTCCCACTTAGTCGTCCACGCCT-ACGTCTCTTCGCCATGCCAGGTTTACAGTCAGGTTC 4187334 Query 295 AACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 || | |||| |||| ||| | |||| ||||| | | ||||||||| ||||||| Sbjct 4187335 AAGGGAGTCTGCTTTGCCCACAGATTTTGCCAAACTA-TCCCCTTGGCTCTGGTTTCATC 4187393 Query 355 AGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 ||| | | || ||||| || | || || || ||||||||||| || ||||||||| Sbjct 4187394 AGACAACAAGTAAAAACAGTAGGCGTATCATTCATTCATTCATGCGCATCCCTAATTAGA 4187453 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC-GCCGTTTACCCGCGCT 473 | ||||||||||||| ||||||| | ||||| |||| ||| | |||||| | ||| Sbjct 4187454 AGGTGAGGCATTTGGCTGTCTTAAGAAAATCATAATTACACCCATCAATTTACCTGGGCT 4187513 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCAC 521 | ||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct 4187514 TCAGCGAATTTCTTCAGTTTGACATTCAAAGCACTGGGCAAAAATCAC 4187561 >seq224040 Length=246 Score = 113 bits (124), Expect = 1e-22 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||||||||| ||| |||| || ||| |||| ||||||||||||||||||| Sbjct 114 CTTTTGCTCTACGAGAGGTTTCCGTCCTCTCTGAGCTAGCCTTAGGACACCTGCGTTACA 55 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATC 116 |||| |||||||| ||||||||| |||||||||| ||||||| |||| || Sbjct 54 GTTTGACAGATGTACCGCCCCAGTCAAACTCCCCGCCTGACACTGTCTTC 5 Score = 77.0 bits (84), Expect = 1e-11 Identities = 56/65 (86%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 445 CATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAG 504 || ||||||||||||||||||||||||||| | ||||| || | ||| |||||||||| Sbjct 182 CAAAGTTACTCCCGCCGTTTACCCGCGCTTACTCGAATTACTACGATTTAACATTCAGAG 241 Query 505 CACTG 509 ||||| Sbjct 242 CACTG 246 >seq73 Length=8013674 Score = 91.5 bits (100), Expect = 5e-16 Identities = 67/78 (86%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 432 ACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACT 491 ||||||||||||||||||| ||||| | |||||| | | || |||| |||||||||| Sbjct 4333194 ACCTTAAGAGAGTCATAGTGACTCCAACTATTTACCTGTGTTTCCTTGACTTTCTTCACT 4333135 Query 492 TTGACATTCAGAGCACTG 509 |||||||||||||||||| Sbjct 4333134 TTGACATTCAGAGCACTG 4333117 >seq12 Length=18026163 Score = 84.2 bits (92), Expect = 7e-14 Identities = 112/153 (73%), Gaps = 12/153 (8%) Strand=Plus/Minus Query 305 TCTTTCCCCGCTGATTCCGCCAAGCCC-GTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 || ||||| |||||||| ||||||||| | | ||||| || |||| || | | ||| Sbjct 11094275 TCCTTCCCTGCTGATTCTGCCAAGCCCTGGTTATTTGGCAGTA-TTTCACTGGCTCCTAG 11094217 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 ||||||||||||| | ||||||||| || |||||| ||||||| || | Sbjct 11094216 GTAGGGACAGTGGG---------AGTCCATTCATAGGCATCACTATGTAGATGATGAAGT 11094166 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCC 456 |||||||| | | | ||||||||||||| ||| Sbjct 11094165 ATTTGGCTCTCGTTA-AGAGTCATAGTTAGTCC 11094134 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1630674992800