Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Vicugna_20pacos_20[refseq_20GCF_5F000164845.2_202013-03-13] 276,725 sequences; 2,172,207,521 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq166 84.2 4e-14 seq120550 82.4 1e-13 >seq166 Length=4038492 Score = 84.2 bits (92), Expect = 4e-14 Identities = 92/120 (77%), Gaps = 2/120 (2%) Strand=Plus/Plus Query 2 TACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGTG 61 || |||||||||| | | |||||| || ||||| | | | | |||| || || || Sbjct 3760584 TATGAGAGGAACCACAGG-TTCAGA-TACTTGGTGTATAGGCTTCACTGAGGAGCCAATG 3760641 Query 62 CCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGCCAG 121 | |||||||||||||| |||||||| |||||||||||||||||||||||| |||| Sbjct 3760642 GGGAGAAGCTACCATCTGTGGGATTATGATTGAACGCCTCTAAGTCAGAATCCAGCCCAG 3760701 >seq120550 Length=383 Score = 82.4 bits (90), Expect = 1e-13 Identities = 88/114 (77%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||||||||||||| || | |||||| | |||||| || || | || | | || | Sbjct 277 GTACGAGAGGAACAGCAGG-TTCAGAC-ATTTGGTTCATGGACTTGACCGATCGGTCAAT 220 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | |||||||| |||||| |||||||| |||||||||||||||||||||||| Sbjct 219 GGTCCGAAGCTAACATCTGGGGGATTATGACTGAACGCCTCTAAGTCAGAATCC 166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817003910400