Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq3342 113 3e-23 seq3317 113 3e-23 seq3118 113 3e-23 seq2646 113 3e-23 seq2326 113 3e-23 seq2097 113 3e-23 seq1666 113 3e-23 seq1628 113 3e-23 seq864 113 3e-23 seq394 113 3e-23 seq384 113 3e-23 seq239 113 3e-23 seq343 111 9e-23 seq217 100 2e-19 seq4092 93.3 2e-17 seq1 89.7 3e-16 >seq3342 Length=4428 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 1368 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1309 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 1308 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1252 >seq3317 Length=4488 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 4203 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 4144 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 4143 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 4087 >seq3118 Length=4797 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 3609 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 3550 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 3549 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 3493 >seq2646 Length=5466 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 3717 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 3776 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 3777 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 3833 >seq2326 Length=5953 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 3176 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 3117 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 3116 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 3060 >seq2097 Length=6308 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 4452 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 4511 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 4512 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 4568 >seq1666 Length=7034 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 3851 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 3910 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 3911 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 3967 >seq1628 Length=7103 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 2438 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 2497 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 2498 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 2554 >seq864 Length=9358 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 772 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 831 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 832 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 888 >seq394 Length=12954 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 7711 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 7770 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 7771 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 7827 >seq384 Length=13075 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 7828 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 7887 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 7888 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 7944 >seq239 Length=15374 Score = 113 bits (124), Expect = 3e-23 Identities = 95/117 (81%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| |||| Sbjct 7641 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 7700 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 7701 GATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 7757 >seq343 Length=13557 Score = 111 bits (122), Expect = 9e-23 Identities = 96/118 (81%), Gaps = 1/118 (1%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGA-TAACATCGCC 59 |||||||||||||||| |||| || ||| |||| |||||| | || |||| |||| Sbjct 8316 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGAGTTCATGGGAATAACGCCGCC 8375 Query 60 CGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| ||||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 8376 GGATCGCTAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 8433 >seq217 Length=15910 Score = 100 bits (110), Expect = 2e-19 Identities = 95/119 (80%), Gaps = 2/119 (2%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATC-GCC 59 |||||||||||||||| |||| || ||| |||| ||| |||| ||||| | ||| Sbjct 10704 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCCGCC 10763 Query 60 CGATCCC-TAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 |||| | |||||||||| ||||| ||| ||||||||||||||||||||||||||| Sbjct 10764 GGATCGCATAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 10822 >seq4092 Length=58290 Score = 93.3 bits (102), Expect = 2e-17 Identities = 95/120 (79%), Gaps = 3/120 (3%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGC-GAGTCAAAATGATAACATCGCC 59 |||||||||||||||| |||| || ||| |||| || | |||| ||||| |||| Sbjct 5398 GAACCCAAAGACTTTGGTTTCCCGGAAGCTGCCCGGCGGGGTCATGGGAATAACGCCGCC 5339 Query 60 CGATCCCTAGTCG-GCATAGTTTACGGTTAAGACTACGACG-GTATCTGATCGTCTTCGA 117 |||| ||||||| |||| ||||| ||| ||||||||| |||||||||||||||||| Sbjct 5338 GGATCGCTAGTCGAGCATCGTTTATGGTCGGAACTACGACGAGTATCTGATCGTCTTCGA 5279 >seq1 Length=748055161 Score = 89.7 bits (98), Expect = 3e-16 Identities = 90/117 (77%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| | ||| |||| | |||| |||||| |||| Sbjct 707745668 GAACCCAAAGACTTTGGTTTCCTGAAAGCTGCCCCTCAGGTCATGGGAATAACACCGCCA 707745727 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 || |||||| |||| ||||| ||| | ||||||| ||||||||||||||||||| Sbjct 707745728 AATTGCTAGTCAGCATCGTTTATGGTCAGAACTACGATGGTATCTGATCGTCTTCGA 707745784 Score = 73.4 bits (80), Expect = 2e-11 Identities = 85/115 (74%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 |||||||||||||||| |||| | ||| |||| | | |||| |||| | || Sbjct 728367089 GAACCCAAAGACTTTGGTTTCCTGGAAGCTGCCTGGTGGGTCATGGGAATAATGCCACCA 728367148 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTC 115 ||| ||||||||||| |||| ||| | |||| || ||||||||||| ||||| Sbjct 728367149 GATTGCTAGTCGGCATCGTTTGTGGTAAGAACTATGATGGTATCTGATCATCTTC 728367203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278386908240