Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25]
5,016 sequences; 3,598,443,077 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq4092 149 3e-33
seq394 149 3e-33
seq384 149 3e-33
seq239 149 3e-33
seq217 149 3e-33
seq8 149 3e-33
seq9 131 7e-28
seq3 131 7e-28
seq343 127 9e-27
seq4 122 4e-25
seq5 111 7e-22
seq1 75.2 5e-11
>seq4092
Length=58290
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 11478 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 11537
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 11538 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 11597
Score = 113 bits (124), Expect = 2e-22
Identities = 125/163 (77%), Gaps = 3/163 (2%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 10382 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 10441
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| ||||| |||
Sbjct 10442 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTTGAA 10501
Query 160 -AGAGAGTT-AAAAAGCACGTGAAATTG-TTGAAAGGGAAGCG 199
|||||||| || | | ||||||| | |||| ||| || ||
Sbjct 10502 GAGAGAGTTCAAGAGGGGCGTGAAACCGTTTGAGAGGTAAACG 10544
>seq394
Length=12954
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1673 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 1614
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 1613 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 1554
Score = 127 bits (140), Expect = 9e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 2754 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 2695
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 2694 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 2635
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||||| ||| || ||
Sbjct 2634 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 2595
>seq384
Length=13075
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1787 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 1728
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 1727 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 1668
Score = 127 bits (140), Expect = 9e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 2868 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 2809
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 2808 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 2749
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||||| ||| || ||
Sbjct 2748 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 2709
>seq239
Length=15374
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 1582 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 1523
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 1522 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 1463
Score = 127 bits (140), Expect = 9e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 2663 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 2604
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 2603 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 2544
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||||| ||| || ||
Sbjct 2543 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 2504
>seq217
Length=15910
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 4619 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 4560
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 4559 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 4500
Score = 123 bits (136), Expect = 1e-25
Identities = 126/162 (78%), Gaps = 2/162 (1%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 5716 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 5657
Query 100 ATTGGCCAGAGACCGATAG-CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGA 158
| ||| ||||||||||| | ||||||| || | ||||| ||||||| ||||| ||
Sbjct 5656 ACCGGCACGAGACCGATAGTCCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTTGA 5597
Query 159 A-AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
| |||||||| || || ||||||| ||||| ||| || ||
Sbjct 5596 AGAGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 5555
>seq8
Length=312544902
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 79103198 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 79103257
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 79103258 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 79103317
>seq9
Length=79335909
Score = 131 bits (144), Expect = 7e-28
Identities = 101/120 (84%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 31350122 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 31350181
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | || ||| ||| ||||||||| | || || | |||||||||||||||
Sbjct 31350182 GTGGAGGTCTGTAGAGGTCCTGACGTGCAAATTGGTCATCCGACCTGGGTATAGGGGCGA 31350241
>seq3
Length=527952102
Score = 131 bits (144), Expect = 7e-28
Identities = 101/120 (84%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||| ||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 128644703 TGTTAGGACCCGAAAAATGGTGAACTATGCCTGGGTAGGGCGAAGCCAGAGGAAACTCTT 128644762
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | |||||| | | ||||||||| |||| || | |||||||||||||||
Sbjct 128644763 GTGGAGGTCTGTAGCGGTACAGACGTGCAAATAGATCCTCCGACCTGGGTATAGGGGCGA 128644822
Score = 113 bits (124), Expect = 2e-22
Identities = 135/181 (75%), Gaps = 2/181 (1%)
Strand=Plus/Plus
Query 505 TGAGGGTGCACCATCGACCGATCCTGA-TGTCTT-CGGATGGATTTGAGTAAGAGCATAG 562
||||||||||||| | || || || |||| | | | | | | ||| | |||| |
Sbjct 144130903 TGAGGGTGCACCACCTGCCCGTCTTGCCTGTCCTGCCGGGGAAGTGGAGCATGAGCGTGT 144130962
Query 563 CTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCT 622
|||| |||||| ||| ||| ||||||||||||| |||| ||||||||||||||||||
Sbjct 144130963 GTGTTAGGACCCAAAACATGATGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCT 144131022
Query 623 GGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCG 682
|||||||| | |||||| || ||||||||||| | || | ||||| || |||||
Sbjct 144131023 GGTGGAGGTCCATAGCGGTCTTGACGTGCAAATCGGTTTTCCGACCTGGGTGTAAGGGCG 144131082
Query 683 A 683
|
Sbjct 144131083 A 144131083
Score = 100 bits (110), Expect = 1e-18
Identities = 91/114 (80%), Gaps = 3/114 (3%)
Strand=Plus/Minus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| |||||||||||||| |||| |||||||| | ||||||||||||||||||| ||
Sbjct 208152292 TTAGGACCCGAAAGATGATGAAATATGCCTGGGCAAGGTGAAGCCAGAGGAAACT---GT 208152236
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||| | || ||| ||| |||||||||| || || || ||| ||||||||
Sbjct 208152235 GGAGGTCCATAGTGGTCCTGATGTGCAAATCGGTCATCCAACTTGAGTATAGGG 208152182
Score = 96.9 bits (106), Expect = 1e-17
Identities = 100/131 (76%), Gaps = 0/131 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
||||| |||| ||||||||||||| | || || || ||| | | ||||| |||||||
Sbjct 387060203 GAGTCAGGTTGCTTGGGAATGCAGCCCAAACCAGGTGGCAAACTCCATCTAAGGCTAAAT 387060144
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 387060143 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 387060084
Query 160 AGAGAGTTAAA 170
|||||||| ||
Sbjct 387060083 AGAGAGTTCAA 387060073
Score = 80.6 bits (88), Expect = 1e-12
Identities = 64/76 (84%), Gaps = 2/76 (3%)
Strand=Plus/Plus
Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608
||| | |||| || ||||||||| | |||||||||||||||||||||| |||| ||||
Sbjct 444307606 GAGCATGAGCTTA--TGTTGGGACTCAAAAGATGGTGAACTATGCCTGAGCAGGGAGAAG 444307663
Query 609 CCAGAGGAAACTCTGG 624
||||||| |||| |||
Sbjct 444307664 CCAGAGGCAACTTTGG 444307679
Score = 77.0 bits (84), Expect = 1e-11
Identities = 87/117 (74%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| |||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 98677231 GAGTCGGGTTGCATGGGAATGCAGCCCAAAGTGGCTGGTAAACTCCATCTAAGGCTAAAT 98677290
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTG 156
| || ||||| |||| |||||| || | ||||| ||||||| ||||||
Sbjct 98677291 ACCAGCACAAGACCAATAGTCATCAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTG 98677347
>seq343
Length=13557
Score = 127 bits (140), Expect = 9e-27
Identities = 124/160 (78%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 3332 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 3273
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 3272 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 3213
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||||| ||| || ||
Sbjct 3212 AGAGAGTTCAAGAGGGCGTGAAACCGTTGAGAGGTAAACG 3173
Score = 118 bits (130), Expect = 4e-24
Identities = 89/102 (87%), Gaps = 2/102 (2%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCG-AAAGATGG-TGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
|||| ||||||| |||||||| ||||||||||||| |||| |||||||||||||||||
Sbjct 2249 TGTTAGGACCCGGAAAGATGGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTC 2190
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTC 663
||||||||| || |||||| ||| ||||||||||| |||||
Sbjct 2189 TGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTC 2148
>seq4
Length=435153693
Score = 122 bits (134), Expect = 4e-25
Identities = 99/120 (83%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||| ||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct 202863299 TGTTAGGACCTGAAAGATGGTGAATTATGCCTGGGCAGGGTGAAGCCAGAGGAAACTCTG 202863358
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| | || || ||| ||||||||||| || || | |||||||||||||||
Sbjct 202863359 GTGGAGATCCATAGAAGTCCTGACGTGCAAATCGGTCATCCGACCTGGGTATAGGGGCGA 202863418
Score = 109 bits (120), Expect = 2e-21
Identities = 96/120 (80%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| ||||| |||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct 353518941 TGTTAGGACCTGAAAGATGGTGAACTATGCCTGGGCAGGGCAAAGCCAGAGGAAACTCTG 353518882
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| | ||| || ||| | |||||||| | ||| |||||||||||| ||
Sbjct 353518881 GTGGAGGTCCATAGCTGTCCTGACATGCAAATCAGTTGTCTGGCCTGGGTATAGGGGTGA 353518822
Score = 84.2 bits (92), Expect = 9e-14
Identities = 78/99 (79%), Gaps = 0/99 (0%)
Strand=Plus/Plus
Query 580 ATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGCAGCG 639
||||||||||| ||| |||| ||||||||||||||||||||||||| || || |
Sbjct 85140812 ATGGTGAACTACTCCTATGCAGGGCAAAGCCAGAGGAAACTCTGGTGGAGGGTCATAGTG 85140871
Query 640 GTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGG 678
|| ||| ||| |||| |||| | |||||||||||||
Sbjct 85140872 GTCCTGCAGTGTAAATTGATCATATGATTTGGGTATAGG 85140910
Score = 80.6 bits (88), Expect = 1e-12
Identities = 97/131 (74%), Gaps = 1/131 (1%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || || || ||| | | ||| | || ||||
Sbjct 155862135 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCAGGTGG-AAACTCCATCTGAGGCAAAAT 155862193
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| | || |||||||||| ||||||| || | |||| ||||||| |||||| |
Sbjct 155862194 ACTAGCACGAGACCGATAATCAACAAGTACTGTAAAGAAAAGTTGAAAAGAACTTTGAAG 155862253
Query 160 AGAGAGTTAAA 170
|||||||| ||
Sbjct 155862254 AGAGAGTTCAA 155862264
>seq5
Length=304825324
Score = 111 bits (122), Expect = 7e-22
Identities = 117/154 (76%), Gaps = 0/154 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||||| | ||||| |||||||
Sbjct 220787517 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGAGGGTGGTAAATTCCATCTAAGGCTAAAT 220787458
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| |||| || || | ||||| |||||| |||||| |
Sbjct 220787457 ACCGGCACGAGACCGATAGTCAACAAATACTGTAAGGGAAAGTAGAAAAGAACTTTGAAG 220787398
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGG 193
|||| ||| || || | ||||| ||||| |||
Sbjct 220787397 AGAGGGTTCAAGAGGGCTTGAAACCGTTGAGAGG 220787364
>seq1
Length=748055161
Score = 75.2 bits (82), Expect = 5e-11
Identities = 91/123 (74%), Gaps = 2/123 (2%)
Strand=Plus/Minus
Query 42 GTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATAT 101
||| |||| |||||||||||||||| |||||| | |||| || |||| |||||||||
Sbjct 527627231 GTCAAGTTATTTGGGAATGCAGCTCAAAATGGATGACAAATACCTGCTAAGGCTAAATAT 527627172
Query 102 TGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAG 161
||| |||||| | || ||||| | | ||||| ||||||| |||| ||||
Sbjct 527627171 TGGTAGGAGACCAAAAGTCAGTAAGTATTATAAAAGAAAGCTGAAAAGAACTT--CAAAG 527627114
Query 162 AGA 164
|||
Sbjct 527627113 AGA 527627111
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079892406800
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