Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25]
5,016 sequences; 3,598,443,077 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq4092 179 2e-43
seq384 179 2e-43
seq343 179 2e-43
seq217 178 6e-43
seq239 176 2e-42
seq394 174 7e-42
seq5 150 8e-35
seq4 105 3e-21
seq3 100 1e-19
seq7 71.6 6e-11
>seq4092
Length=58290
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 10157 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 10216
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||||||||||||||||||| |||||||||||
Sbjct 10217 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 10258
>seq384
Length=13075
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3091 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 3032
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||||||||||||||||||| |||||||||||
Sbjct 3031 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 2990
>seq343
Length=13557
Score = 179 bits (198), Expect = 2e-43
Identities = 101/102 (99%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3555 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 3496
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||||||||||||||||||| |||||||||||
Sbjct 3495 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 3454
>seq217
Length=15910
Score = 178 bits (196), Expect = 6e-43
Identities = 100/101 (99%), Gaps = 0/101 (0%)
Strand=Plus/Minus
Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 5939 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 5880
Query 62 CGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||| |||||||||||
Sbjct 5879 CGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 5839
>seq239
Length=15374
Score = 176 bits (194), Expect = 2e-42
Identities = 100/102 (98%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2886 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 2827
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||||||||||||||||||| ||||||| |||
Sbjct 2826 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGTGTA 2785
>seq394
Length=12954
Score = 174 bits (192), Expect = 7e-42
Identities = 101/103 (98%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACC-AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct 2978 GGAAAAGAAACTAACCCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 2919
Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
||||||||||||||||||||||||||||||| |||||||||||
Sbjct 2918 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 2876
>seq5
Length=304825324
Score = 150 bits (166), Expect = 8e-35
Identities = 96/103 (93%), Gaps = 1/103 (1%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||| |||||| |||||||||| |||||||||||| |||||||||||||
Sbjct 220787734 GGAAAAGAAACTAACAAGGATTTCCTCAGTAACCGCGAGTGAACAGCGAAGAGCCCAGCG 220787675
Query 61 CCGAATCCCC-GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||| ||||||||||||||||||| |||||||||||
Sbjct 220787674 CCGAATCCCCACCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 220787632
Score = 80.6 bits (88), Expect = 1e-13
Identities = 49/52 (94%), Gaps = 0/52 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGA 52
|||||||||||||||||||||||||||||||| || ||||||||||| ||||
Sbjct 70218787 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGTGAGTGAACAGGAAAGA 70218838
>seq4
Length=435153693
Score = 105 bits (116), Expect = 3e-21
Identities = 75/86 (87%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76
|||||||||||||||| ||||||||||||||||||||||||| || |||||||| ||||
Sbjct 155861928 AGGATTCCCTCAGTAAAGGCGAGTGAACAGGGAAGAGCCCAGAGCTGAATCCCCACCCCA 155861987
Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102
||||||| | || |||||||| ||
Sbjct 155861988 TGGTGGGGTACAGGCCATGTGGCTTA 155862013
>seq3
Length=527952102
Score = 100 bits (110), Expect = 1e-19
Identities = 82/102 (80%), Gaps = 12/102 (12%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct 387060414 GGAAAAGAAACTAACCAGGATTCCCTCCGTAATGGCGAATGAACAGGGAA---------- 387060365
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||| || || |||||||||| || |||||||||||
Sbjct 387060364 --GAATCCCCACCACGTGGTGGGGCGCAGGCCATGTGGCGTA 387060325
>seq7
Length=260857928
Score = 71.6 bits (78), Expect = 6e-11
Identities = 56/66 (85%), Gaps = 1/66 (2%)
Strand=Plus/Minus
Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGC-CCAGCGCC 62
||||||||||||||| ||||||||||||| || ||||| || |||||||| ||| | ||
Sbjct 250159131 AAAGAAACTAACCAGCCTTCCCTCAGTAACAGCAAGTGAGCAAGGAAGAGCTCCATCACC 250159072
Query 63 GAATCC 68
|||||
Sbjct 250159071 AAATCC 250159066
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230389165440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |