Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq4092 179 2e-43 seq384 179 2e-43 seq343 179 2e-43 seq217 178 6e-43 seq239 176 2e-42 seq394 174 7e-42 seq5 150 8e-35 seq4 105 3e-21 seq3 100 1e-19 seq7 71.6 6e-11 >seq4092 Length=58290 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10157 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 10216 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||| ||||||||||| Sbjct 10217 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 10258 >seq384 Length=13075 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3091 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 3032 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||| ||||||||||| Sbjct 3031 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 2990 >seq343 Length=13557 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 3555 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 3496 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||| ||||||||||| Sbjct 3495 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 3454 >seq217 Length=15910 Score = 178 bits (196), Expect = 6e-43 Identities = 100/101 (99%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 2 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 61 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 5939 GAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGC 5880 Query 62 CGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||| ||||||||||| Sbjct 5879 CGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 5839 >seq239 Length=15374 Score = 176 bits (194), Expect = 2e-42 Identities = 100/102 (98%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2886 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 2827 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||||||||||||||||||| ||||||| ||| Sbjct 2826 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGTGTA 2785 >seq394 Length=12954 Score = 174 bits (192), Expect = 7e-42 Identities = 101/103 (98%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACC-AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| Sbjct 2978 GGAAAAGAAACTAACCCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 2919 Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| ||||||||||| Sbjct 2918 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 2876 >seq5 Length=304825324 Score = 150 bits (166), Expect = 8e-35 Identities = 96/103 (93%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| |||||| |||||||||| |||||||||||| ||||||||||||| Sbjct 220787734 GGAAAAGAAACTAACAAGGATTTCCTCAGTAACCGCGAGTGAACAGCGAAGAGCCCAGCG 220787675 Query 61 CCGAATCCCC-GCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||| ||||||||||||||||||| ||||||||||| Sbjct 220787674 CCGAATCCCCACCCCCGCGGTGGGGCGCGGGCCATGTGGCGTA 220787632 Score = 80.6 bits (88), Expect = 1e-13 Identities = 49/52 (94%), Gaps = 0/52 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGA 52 |||||||||||||||||||||||||||||||| || ||||||||||| |||| Sbjct 70218787 GGAAAAGAAACTAACCAGGATTCCCTCAGTAATGGTGAGTGAACAGGAAAGA 70218838 >seq4 Length=435153693 Score = 105 bits (116), Expect = 3e-21 Identities = 75/86 (87%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 17 AGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCG 76 |||||||||||||||| ||||||||||||||||||||||||| || |||||||| |||| Sbjct 155861928 AGGATTCCCTCAGTAAAGGCGAGTGAACAGGGAAGAGCCCAGAGCTGAATCCCCACCCCA 155861987 Query 77 CGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||| | || |||||||| || Sbjct 155861988 TGGTGGGGTACAGGCCATGTGGCTTA 155862013 >seq3 Length=527952102 Score = 100 bits (110), Expect = 1e-19 Identities = 82/102 (80%), Gaps = 12/102 (12%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||| |||| ||||| ||||||||||| Sbjct 387060414 GGAAAAGAAACTAACCAGGATTCCCTCCGTAATGGCGAATGAACAGGGAA---------- 387060365 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||| || || |||||||||| || ||||||||||| Sbjct 387060364 --GAATCCCCACCACGTGGTGGGGCGCAGGCCATGTGGCGTA 387060325 >seq7 Length=260857928 Score = 71.6 bits (78), Expect = 6e-11 Identities = 56/66 (85%), Gaps = 1/66 (2%) Strand=Plus/Minus Query 4 AAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGC-CCAGCGCC 62 ||||||||||||||| ||||||||||||| || ||||| || |||||||| ||| | || Sbjct 250159131 AAAGAAACTAACCAGCCTTCCCTCAGTAACAGCAAGTGAGCAAGGAAGAGCTCCATCACC 250159072 Query 63 GAATCC 68 ||||| Sbjct 250159071 AAATCC 250159066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230389165440