Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25]
5,016 sequences; 3,598,443,077 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq4092 91.5 9e-17
seq3342 91.5 9e-17
seq3118 91.5 9e-17
seq2646 91.5 9e-17
seq2326 91.5 9e-17
seq2097 91.5 9e-17
seq1666 91.5 9e-17
seq1628 91.5 9e-17
seq864 91.5 9e-17
seq394 91.5 9e-17
seq384 91.5 9e-17
seq343 91.5 9e-17
seq239 91.5 9e-17
seq217 91.5 9e-17
>seq4092
Length=58290
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 5978 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 5921
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 5920 TAAT-CAACGCAAGCT 5906
>seq3342
Length=4428
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1940 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1883
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 1882 TAAT-CAACGCAAGCT 1868
>seq3118
Length=4797
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 4181 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 4124
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 4123 TAAT-CAACGCAAGCT 4109
>seq2646
Length=5466
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 3145 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 3202
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 3203 TAAT-CAACGCAAGCT 3217
>seq2326
Length=5953
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 3748 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 3691
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 3690 TAAT-CAACGCAAGCT 3676
>seq2097
Length=6308
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 3880 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 3937
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 3938 TAAT-CAACGCAAGCT 3952
>seq1666
Length=7034
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 3279 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 3336
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 3337 TAAT-CAACGCAAGCT 3351
>seq1628
Length=7103
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 1866 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 1923
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 1924 TAAT-CAACGCAAGCT 1938
>seq864
Length=9358
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 200 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 257
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 258 TAAT-CAACGCAAGCT 272
>seq394
Length=12954
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 7139 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 7196
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 7197 TAAT-CAACGCAAGCT 7211
>seq384
Length=13075
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 7256 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 7313
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 7314 TAAT-CAACGCAAGCT 7328
>seq343
Length=13557
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 7744 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 7801
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 7802 TAAT-CAACGCAAGCT 7816
>seq239
Length=15374
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 7069 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 7126
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 7127 TAAT-CAACGCAAGCT 7141
>seq217
Length=15910
Score = 91.5 bits (100), Expect = 9e-17
Identities = 68/76 (89%), Gaps = 3/76 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| ||||||||||| |||||||||||||||||||
Sbjct 10131 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGCGGTGTGTACAAAGGGCAGGGACT 10188
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 10189 TAAT-CAACGCAAGCT 10203
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300785854880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |