Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq3342 82.4 9e-14 seq3317 82.4 9e-14 seq3118 82.4 9e-14 seq2646 82.4 9e-14 seq2326 82.4 9e-14 seq1666 82.4 9e-14 seq1628 82.4 9e-14 seq864 82.4 9e-14 seq394 82.4 9e-14 seq384 82.4 9e-14 seq343 82.4 9e-14 seq239 82.4 9e-14 seq217 82.4 9e-14 seq2097 78.8 1e-12 seq5 78.8 1e-12 seq4092 73.4 5e-11 >seq3342 Length=4428 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 1104 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 1046 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 1045 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 986 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 985 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 926 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 925 GCCTCGCGGCGGACC 911 >seq3317 Length=4488 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 3939 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 3881 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 3880 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 3821 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 3820 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 3761 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 3760 GCCTCGCGGCGGACC 3746 >seq3118 Length=4797 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 3345 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 3287 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 3286 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 3227 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 3226 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 3167 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 3166 GCCTCGCGGCGGACC 3152 >seq2646 Length=5466 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 3981 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 4039 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 4040 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 4099 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 4100 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 4159 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 4160 GCCTCGCGGCGGACC 4174 >seq2326 Length=5953 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 2912 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 2854 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 2853 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 2794 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 2793 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 2734 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 2733 GCCTCGCGGCGGACC 2719 >seq1666 Length=7034 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 4115 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 4173 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 4174 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 4233 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 4234 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 4293 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 4294 GCCTCGCGGCGGACC 4308 >seq1628 Length=7103 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 2702 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 2760 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 2761 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 2820 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 2821 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 2880 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 2881 GCCTCGCGGCGGACC 2895 >seq864 Length=9358 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 1036 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 1094 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 1095 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 1154 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 1155 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 1214 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 1215 GCCTCGCGGCGGACC 1229 >seq394 Length=12954 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 7975 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 8033 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 8034 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8093 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 8094 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8153 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 8154 GCCTCGCGGCGGACC 8168 >seq384 Length=13075 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 8092 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 8150 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 8151 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8210 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 8211 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8270 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 8271 GCCTCGCGGCGGACC 8285 >seq343 Length=13557 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 8581 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 8639 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 8640 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8699 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 8700 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8759 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 8760 GCCTCGCGGCGGACC 8774 >seq239 Length=15374 Score = 82.4 bits (90), Expect = 9e-14 Identities = 141/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 7905 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 7963 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125 |||||||||||||||||||||||| |||| ||||| | | | || || | | | Sbjct 7964 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8023 Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180 ||| || ||| |||| ||| | || ||||| | |||||||| | || || ||| Sbjct 8024 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8083 Query 181 GCCGTGAGGCGGACC 195 ||| | |||||||| Sbjct 8084 GCCTCGCGGCGGACC 8098 >seq217 Length=15910 Score = 82.4 bits (90), Expect = 9e-14 Identities = 79/101 (78%), Gaps = 3/101 (3%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 10974 AAACCAACAAAATAGAACCGAGGGTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 11033 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 11034 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 11074 >seq2097 Length=6308 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Plus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 4716 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 4774 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 4775 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 4815 >seq5 Length=304825324 Score = 78.8 bits (86), Expect = 1e-12 Identities = 79/101 (78%), Gaps = 4/101 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69 ||||||||||||||| || ||||||||| |||||||| ||| |||| | |||| Sbjct 93864035 AAACCAACAAAATAGA-ACCAGGGTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 93863977 Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 |||||||||||||||||||||||| |||| ||||| Sbjct 93863976 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 93863936 >seq4092 Length=58290 Score = 73.4 bits (80), Expect = 5e-11 Identities = 79/103 (77%), Gaps = 4/103 (4%) Strand=Plus/Minus Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68 |||||||||||| | || ||||||||| |||||||| ||| |||| | |||| Sbjct 5130 AAACCAACAAAAATAGAACCGGGGTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGGC 5071 Query 69 GTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108 | |||||||||||||||||||||||| |||| |||||| Sbjct 5070 GACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAA 5028 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595171077744