Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25]
5,016 sequences; 3,598,443,077 total letters
Query= AAMG01001634.1
Length=217
Score E
Sequences producing significant alignments: (Bits) Value
seq3342 82.4 9e-14
seq3317 82.4 9e-14
seq3118 82.4 9e-14
seq2646 82.4 9e-14
seq2326 82.4 9e-14
seq1666 82.4 9e-14
seq1628 82.4 9e-14
seq864 82.4 9e-14
seq394 82.4 9e-14
seq384 82.4 9e-14
seq343 82.4 9e-14
seq239 82.4 9e-14
seq217 82.4 9e-14
seq2097 78.8 1e-12
seq5 78.8 1e-12
seq4092 73.4 5e-11
>seq3342
Length=4428
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 1104 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 1046
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 1045 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 986
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 985 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 926
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 925 GCCTCGCGGCGGACC 911
>seq3317
Length=4488
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 3939 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 3881
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 3880 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 3821
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 3820 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 3761
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 3760 GCCTCGCGGCGGACC 3746
>seq3118
Length=4797
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 3345 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 3287
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 3286 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 3227
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 3226 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 3167
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 3166 GCCTCGCGGCGGACC 3152
>seq2646
Length=5466
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 3981 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 4039
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 4040 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 4099
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 4100 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 4159
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 4160 GCCTCGCGGCGGACC 4174
>seq2326
Length=5953
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 2912 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 2854
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 2853 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 2794
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 2793 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 2734
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 2733 GCCTCGCGGCGGACC 2719
>seq1666
Length=7034
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 4115 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 4173
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 4174 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 4233
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 4234 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 4293
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 4294 GCCTCGCGGCGGACC 4308
>seq1628
Length=7103
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 2702 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 2760
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 2761 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 2820
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 2821 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 2880
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 2881 GCCTCGCGGCGGACC 2895
>seq864
Length=9358
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 1036 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 1094
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 1095 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 1154
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 1155 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 1214
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 1215 GCCTCGCGGCGGACC 1229
>seq394
Length=12954
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 7975 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 8033
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 8034 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8093
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 8094 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8153
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 8154 GCCTCGCGGCGGACC 8168
>seq384
Length=13075
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 8092 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 8150
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 8151 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8210
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 8211 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8270
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 8271 GCCTCGCGGCGGACC 8285
>seq343
Length=13557
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 8581 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 8639
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 8640 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8699
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 8700 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8759
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 8760 GCCTCGCGGCGGACC 8774
>seq239
Length=15374
Score = 82.4 bits (90), Expect = 9e-14
Identities = 141/195 (72%), Gaps = 10/195 (5%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 7905 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 7963
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG-TCCTGGTTCCTCCGCA 125
|||||||||||||||||||||||| |||| ||||| | | | || || | | |
Sbjct 7964 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAACGCTTCGGGCCCCGCGGGA 8023
Query 126 CAC-CAATGAAG-GCAT-ACGGGCTCACCAAGAGGTA-GGGCTGGGTAATGCAGT-ACTC 180
||| || ||| |||| ||| | || ||||| | |||||||| | || || |||
Sbjct 8024 CACTCAGCTAAGAGCATCGAGGGGGCGCCGAGAGGCAGGGGCTGGGACAGGCGGTGGCTC 8083
Query 181 GCCGTGAGGCGGACC 195
||| | ||||||||
Sbjct 8084 GCCTCGCGGCGGACC 8098
>seq217
Length=15910
Score = 82.4 bits (90), Expect = 9e-14
Identities = 79/101 (78%), Gaps = 3/101 (3%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 10974 AAACCAACAAAATAGAACCGAGGGTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 11033
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
|||||||||||||||||||||||| |||| |||||
Sbjct 11034 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 11074
>seq2097
Length=6308
Score = 78.8 bits (86), Expect = 1e-12
Identities = 79/101 (78%), Gaps = 4/101 (4%)
Strand=Plus/Plus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 4716 AAACCAACAAAATAGAACCGGG-GTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 4774
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
|||||||||||||||||||||||| |||| |||||
Sbjct 4775 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 4815
>seq5
Length=304825324
Score = 78.8 bits (86), Expect = 1e-12
Identities = 79/101 (78%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCGGGCG 69
||||||||||||||| || ||||||||| |||||||| ||| |||| | ||||
Sbjct 93864035 AAACCAACAAAATAGA-ACCAGGGTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGCG 93863977
Query 70 TAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107
|||||||||||||||||||||||| |||| |||||
Sbjct 93863976 ACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAA 93863936
>seq4092
Length=58290
Score = 73.4 bits (80), Expect = 5e-11
Identities = 79/103 (77%), Gaps = 4/103 (4%)
Strand=Plus/Minus
Query 10 AAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC-GGGC 68
|||||||||||| | || ||||||||| |||||||| ||| |||| | ||||
Sbjct 5130 AAACCAACAAAAATAGAACCGGGGTCCTATTCCATTATTCCTAGCTGGGGTATCCAGGGC 5071
Query 69 GTAA---GCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAA 108
| |||||||||||||||||||||||| |||| ||||||
Sbjct 5070 GACTCGGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAAAA 5028
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595171077744
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |