Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25] 5,016 sequences; 3,598,443,077 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq4092 477 3e-132 seq217 439 8e-121 seq5 277 6e-72 seq4 273 7e-71 seq1 253 7e-65 seq3942 250 8e-64 seq3 226 9e-57 seq2 131 5e-28 seq8 93.3 1e-16 >seq4092 Length=58290 Score = 477 bits (528), Expect = 3e-132 Identities = 284/297 (96%), Gaps = 0/297 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 |||||||||||||||||||||||| ||| ||||| | | |||||||||||||||||| Sbjct 14050 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 13991 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13990 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 13931 Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416 ||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 13930 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 13871 Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 13870 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 13811 Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 13810 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 13754 Score = 122 bits (134), Expect = 3e-25 Identities = 105/129 (81%), Gaps = 6/129 (5%) Strand=Plus/Minus Query 7 CTTTTGCTCT-ACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| Sbjct 14389 CTTCTGCTCCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTAC 14330 Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125 ||||| |||| ||| ||||||||| |||||||||||||||||| |||| |||||| Sbjct 14329 GGTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC-----CCCGGAG 14275 Query 126 CGGCCCGCG 134 ||| |||| Sbjct 14274 CGGGTCGCG 14266 >seq217 Length=15910 Score = 439 bits (486), Expect = 8e-121 Identities = 284/303 (94%), Gaps = 6/303 (2%) Strand=Plus/Plus Query 237 CTCCCACTT-ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||| ||||||||||||||| ||| ||||| | | ||||||||||||||||| Sbjct 2144 CTCCCACTTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCA 2203 Query 296 ACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2204 ACAGGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 2263 Query 355 AGATA-GTAGATAGGGACAGTGGG-AATCT-CGTTAATCCATTCATGCGCGTCACTAATT 411 ||||| |||| ||||||||||||| ||||| |||| |||||||||||||||||||||||| Sbjct 2264 AGATAAGTAGGTAGGGACAGTGGGGAATCTTCGTTCATCCATTCATGCGCGTCACTAATT 2323 Query 412 A-GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 470 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2324 AAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 2383 Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530 |||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2384 GCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCA 2443 Query 531 ACA 533 ||| Sbjct 2444 ACA 2446 Score = 114 bits (126), Expect = 4e-23 Identities = 105/130 (81%), Gaps = 7/130 (5%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGC-GTTAT 65 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||| |||| Sbjct 1797 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCCGTTAC 1856 Query 66 GGTT-TAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124 |||| | |||| ||| ||||||||| |||||||||||||||||| |||| |||||| Sbjct 1857 GGTTGTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC-----CCCGGA 1911 Query 125 TCGGCCCGCG 134 ||| |||| Sbjct 1912 GCGGGTCGCG 1921 >seq5 Length=304825324 Score = 277 bits (306), Expect = 6e-72 Identities = 193/218 (89%), Gaps = 1/218 (0%) Strand=Plus/Plus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT- 338 |||| || |||||||||||||||||||||| || ||||||||| |||||||| |||||| Sbjct 241188565 ACTACAGCCAAGCTCAACAGGGTCTTCTTTTCCTGCTGATTCCACCAAGCCCATTCCCTG 241188624 Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398 ||||||||||||| ||||||||||| |||||||||||| ||||||||| ||||||||||| Sbjct 241188625 TGGCTGTGGTTTCACTAGATAGTAGGTAGGGACAGTGGAAATCTCGTTCATCCATTCATG 241188684 Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458 || ||||||||||||||| |||| |||||| ||||||||||||||| ||||||||||| Sbjct 241188685 TGCCTCACTAATTAGATGATGAGGTATTTGGATACCTTAAGAGAGTCCTAGTTACTCCCA 241188744 Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496 || ||||||| |||| ||||||||||| || ||||| Sbjct 241188745 CCATTTACCCATGCTTCATTGAATTTCTTTACCTTGAC 241188782 Score = 149 bits (164), Expect = 2e-33 Identities = 205/283 (72%), Gaps = 9/283 (3%) Strand=Plus/Minus Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 |||| ||||| | ||||||| || |||||| | | ||||||| ||||||| || Sbjct 254219063 TCCCTCTTATGCCGTACCTCTCCTCTCTCTTCACAGTGCCAGACTAGAATCAAGCTAAAA 254219004 Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 | |||||| |||| || |||| || || | || || ||||||||| ||| ||||| Sbjct 254219003 GAGTTCTTCTGTCCCGGCGAATTCAGCTAATCTCGAACCGTTGGCTGTGTCTTC-CTAGA 254218945 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417 | || ||||||||| || || || || ||||||| || |||||||| |||||| Sbjct 254218944 ------AGAGAGACAGTGGGTATGTC-TTCATTCATTCATAAGCATCACTAATCAGATGA 254218892 Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477 |||||||||||||||||||| | | || |||| || || ||||| | | | | Sbjct 254218891 GGAGGCATTTGGCTACCTTAAAACAATCTCGGTTAACCCAGCTGTTTATTCAGGAGTCAT 254218832 Query 478 T-GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519 | ||| ||||||||||||| |||| |||| ||| ||||||| Sbjct 254218831 TCAAATGTCTTCACTTTGACTTTCAAAGCAGCGGGAAGAAATC 254218789 Score = 87.8 bits (96), Expect = 6e-15 Identities = 124/174 (71%), Gaps = 3/174 (2%) Strand=Plus/Plus Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424 |||||||||| |||||| || ||||||| | | |||||| | |||| || ||||| Sbjct 90344440 TAGGGACAGTTAGAATCTTTTTTATCCATTTCTATGTATCACTAGTCAGATAACAAGGCA 90344499 Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC---GCTTGGTTGAA 481 ||| || ||||| |||||||| ||| ||| |||| || | | || |||| Sbjct 90344500 CTTGACTCTAATAAGAAAGTCATAGATACGCCCATTGTTTGCCACCTAAGTTTCACTGAA 90344559 Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||| || |||||| ||| ||| ||||||||||| | || ||| |||| Sbjct 90344560 TTTCTTTACCTTGACACATGGAGTACTAGGCAGAAATCATAATGAATCAGCATC 90344613 >seq4 Length=435153693 Score = 273 bits (302), Expect = 7e-71 Identities = 192/218 (88%), Gaps = 2/218 (1%) Strand=Plus/Minus Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302 |||||||||||||||||| ||| |||||| ||| | | |||||||||||||||||||| Sbjct 148859918 CTTATTCTACACCTCTCATGTCTCTTCACAGTGTCAGCCGAGAGTCAAGCTCAACAGGGT 148859859 Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362 ||||||||||||||||||| |||||| |||||||||||||| ||||||||| |||||||| Sbjct 148859858 CTTCTTTCCCCGCTGATTCTGCCAAGTCCGTTCCCTTGGCTCTGGTTTCGCCAGATAGTA 148859799 Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422 | ||||||||||||||||| || ||| ||||| | | |||||||||||| |||||||| Sbjct 148859798 AGTTGGGACAGTGGGAATCTCATTCATCTATTCAAGTGTGTCACTAATTAGGTGACGAGG 148859739 Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 ||||||||||| ||||||||||| ||||||||| ||| Sbjct 148859738 CATTTGGCTACTTTAAGAGAGTC--AGTTACTCCTGCC 148859703 Score = 109 bits (120), Expect = 2e-21 Identities = 93/115 (81%), Gaps = 5/115 (4%) Strand=Plus/Minus Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79 |||| ||||||| |||| |||| | ||||||||||||||||||| ||||| |||| ||| Sbjct 74351609 GGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACGGTTTGACAGGTGT 74351550 Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCG 134 ||||| ||| |||| ||||||||||||| |||| |||||| ||| |||| Sbjct 74351549 ACCGCCACAGTCAAATTCCCCACCTGACACTGTC-----CCCGGAGCGGGTCGCG 74351500 Score = 84.2 bits (92), Expect = 7e-14 Identities = 67/81 (83%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366 ||| ||| ||||||| |||||||| |||||||||||||||||| ||||||||||| | Sbjct 280817315 TTTTCCCACTGATTCTACCAAGCCCATTCCCTTGGCTGTGGTTTTCCTAGATAGTAGGTG 280817374 Query 367 GGGACAGTGGGAATCTCGTTA 387 | |||| | | |||||| ||| Sbjct 280817375 GAGACAATTGAAATCTCATTA 280817395 >seq1 Length=748055161 Score = 253 bits (280), Expect = 7e-65 Identities = 211/256 (82%), Gaps = 3/256 (1%) Strand=Plus/Plus Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338 ||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| | || ||| Sbjct 348322400 GACTAGAGTCAAGTTCAGCAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCTCATTACCT 348322459 Query 339 TGGCTGTGGTTT-CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397 || ||||||| | |||||| ||| | ||| ||||| || || ||| ||||| |||| Sbjct 348322460 GAGCGGTGGTTTTCACTAGAT--TAGGTCCGGATAGTGGAAAACTTGTTCATCCAATCAT 348322517 Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457 || ||||||||||||||| |||||||||||||||||||||||||| ||||||| ||| Sbjct 348322518 GCATATCACTAATTAGATGATGAGGCATTTGGCTACCTTAAGAGAGTAATAGTTATTCCT 348322577 Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517 ||| ||||| | ||| |||||||||||||||||||| || | |||| |||| ||||| Sbjct 348322578 GCCATTTACTCATGCTCCATTGAATTTCTTCACTTTGACCTTTAAAGCATTGGGAAGAAA 348322637 Query 518 TCACATTGCGTCAACA 533 ||| |||| |||| || Sbjct 348322638 TCATATTGTGTCATCA 348322653 Score = 174 bits (192), Expect = 5e-41 Identities = 153/185 (83%), Gaps = 8/185 (4%) Strand=Plus/Minus Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339 |||| |||||| ||||||||||||||||||| || || | | |||| ||| |||| ||| Sbjct 379474825 ACTA-AGTCAAACTCAACAGGGTCTTCTTTCACCACTAACTTTGCCACGCCTGTTCTCTT 379474767 Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399 || |||||||| |||| ||||||| ||||||||||| |||||| ||| ||||||||| | Sbjct 379474766 GGTTGTGGTTTTGCTAAATAGTAGGTAGGGACAGTGAGAATCTTGTTCATCCATTCA--C 379474709 Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459 |||||||||||||| || |||||||| ||| |||| |||||||||||||||| | | Sbjct 379474708 ATGTCACTAATTAGATAACAAGGCATTT-GCT--CTTA--AGAGTCATAGTTACTCTCAC 379474654 Query 460 CGTTT 464 | ||| Sbjct 379474653 CATTT 379474649 Score = 116 bits (128), Expect = 1e-23 Identities = 107/133 (80%), Gaps = 2/133 (2%) Strand=Plus/Plus Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461 |||| |||||||||| | ||||||| |||| ||| |||| ||||||| || || || | | Sbjct 715337154 GTCATTAATTAGATGTCAAGGCATT-GGCTCCCTCAAGAAAGTCATAATTCCTTCCACTG 715337212 Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC-ACTGGGCAGAAATCA 520 |||||| | || |||||||||||||||||| ||||||||| | | || |||||||| Sbjct 715337213 TTTACCTTCATTTCACTGAATTTCTTCACTTTGATATTCAGAGCAAGTAGGAAGAAATCA 715337272 Query 521 CATTGCGTCAACA 533 ||||| |||||| Sbjct 715337273 CATTGTTTCAACA 715337285 Score = 104 bits (114), Expect = 8e-20 Identities = 87/107 (81%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| | |||| ||||||| |||| |||| | ||||||||||| ||| ||| | Sbjct 708294093 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACTTGCATTACG 708294152 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| ||| | ||||||| |||||||||||||||| | |||| Sbjct 708294153 GTTTGACAGGTGTACTGCCCCAGTCAAACTCCCCACCTGATACTGTC 708294199 Score = 96.9 bits (106), Expect = 1e-17 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489 || ||| || |||||||||||||||| | ||| | | || || |||||||||||| Sbjct 715311911 CTCCCTCAACAGAGTCATAGTTACTCTCCTAGTTCATCTGCATTTCACTGAATTTCTTCA 715311852 Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||| || |||||| |||||||| | || ||||||||| Sbjct 715311851 CTTTGACATTCAAAGAACTGGGAAGAAATCAAACTGTGTCAACATC 715311806 Score = 82.4 bits (90), Expect = 2e-13 Identities = 57/65 (88%), Gaps = 0/65 (0%) Strand=Plus/Plus Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446 ||| |||||||| | |||||||||||||||| ||| |||||| ||||||||||||| | | Sbjct 117108784 AATTCATTCATGTGGGTCACTAATTAGATGATGAGACATTTGCCTACCTTAAGAGAATTA 117108843 Query 447 TAGTT 451 ||||| Sbjct 117108844 TAGTT 117108848 >seq3942 Length=472507 Score = 250 bits (276), Expect = 8e-64 Identities = 159/173 (92%), Gaps = 0/173 (0%) Strand=Plus/Minus Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420 ||||| |||||||||||||||| || |||||||||||| ||||||||||||||||| | Sbjct 180680 TAGATCAGGACAGTGGGAATCTCTTTCATCCATTCATGCATGTCACTAATTAGATGACTA 180621 Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480 |||||||||||||||||||||||||||||||||||| || ||||||| || ||| |||| Sbjct 180620 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCTGTTTACCTGCTCTTCATTGA 180561 Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 180560 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 180508 >seq3 Length=527952102 Score = 226 bits (250), Expect = 9e-57 Identities = 180/214 (84%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388 ||| ||| |||| |||||||||| ||||| ||||| |||||||| ||| |||||| || | Sbjct 460671978 CCCATTCTCTTGACTGTGGTTTCACTAGACAGTAGGTAGGGACAATGGAAATCTCATTCA 460671919 Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448 ||||||||||| ||||||||||| |||| |||||||||| || |||||||||||| ||| Sbjct 460671918 TCCATTCATGCATGTCACTAATTATATGATGAGGCATTTGACTTCCTTAAGAGAGTTATA 460671859 Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA-TTTCTTCACTTTGACATTCAGAGCAC 507 ||||||||| || ||||| | |||| ||||| ||| ||||||||| |||||||||||| Sbjct 460671858 GTTACTCCCACCTATTACCTGTGCTTCATTGAATTTTATTCACTTTGGCATTCAGAGCAC 460671799 Query 508 TGGGCAGAAATCACATTGCGTCAACA-TCACTTT 540 ||| | ||||||||| | |||||| ||||||| Sbjct 460671798 TGGAGAAAAATCACATCCCATCAACACTCACTTT 460671765 Score = 174 bits (192), Expect = 5e-41 Identities = 129/150 (86%), Gaps = 2/150 (1%) Strand=Plus/Plus Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351 |||||||| ||||||||||| |||||||| | ||||| ||||||||||||||||||| Sbjct 314874483 CTCAACAG--TCTTCTTTCCCTTCTGATTCCACTAAGCCTGTTCCCTTGGCTGTGGTTTT 314874540 Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411 ||||||||||||||||||||||||| |||||| || || |||||||| | |||||||| Sbjct 314874541 GCTAGATAGTAGATAGGGACAGTGGAAATCTCATTTATACATTCATGAACACCACTAATT 314874600 Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAG 441 ||||||| | | |||||| |||||||||| Sbjct 314874601 AGATGACAAAACGTTTGGCAACCTTAAGAG 314874630 Score = 116 bits (128), Expect = 1e-23 Identities = 90/107 (84%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 ||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| | Sbjct 422599389 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTAGG 422599330 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113 |||| |||| || || || ||| ||||||||||||||||||||||| Sbjct 422599329 GTTTGACAGGCGTACCTCCTCAGTCAAACTCCCCACCTGACAATGTC 422599283 Score = 111 bits (122), Expect = 5e-22 Identities = 79/91 (87%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502 ||||||||||||| ||| |||||| || ||| ||||||||||||||||||| |||||| Sbjct 286398782 GTCATAGTTACTCTTGCCATTTACCTGCACTTCCTTGAATTTCTTCACTTTGATATTCAG 286398723 Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||| || ||||||| Sbjct 286398722 AGCACTGGGCAGAAATCATATCTTGTCAACA 286398692 Score = 105 bits (116), Expect = 2e-20 Identities = 87/105 (83%), Gaps = 1/105 (1%) Strand=Plus/Plus Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462 ||||| ||||| | | ||||||||||||| | |||| ||||||||||||| ||| ||| | Sbjct 312820844 TCACTCATTAGGTAATGAGGCATTTGGCTGCTTTAAAAGAGTCATAGTTATTCCTGCCTT 312820903 Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 ||| | | |||| |||||||||| |||||||||||||||||| Sbjct 312820904 TTAACAG-GCTTCATTGAATTTCTCAGCTTTGACATTCAGAGCAC 312820947 Score = 96.9 bits (106), Expect = 1e-17 Identities = 117/156 (75%), Gaps = 5/156 (3%) Strand=Plus/Plus Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||||| ||||| || ||| | ||||| || ||||||||| |||| ||||||||| Sbjct 503138560 GACAGTGGAGATCTCATTCATCTAGTCATGTGCACCACTAATTAAATGATAAGGCATTTG 503138619 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 |||| |||||| | || ||||| | | | ||| || | || |||| || || ||| Sbjct 503138620 GCTAGCTTAAGCAACTC--AGTTAATTCTGTTGTTGACGTGTCCTAGGTT-AAGTTTTTC 503138676 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524 ||||||| ||| ||| || | |||||||||| ||| Sbjct 503138677 ACTTTGAAATT--GAGAACAGAGCAGAAATCATATT 503138710 Score = 91.5 bits (100), Expect = 5e-16 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||||||||||| ||||| ||| ||||| | |||||||||||||||||| Sbjct 295350418 CTCCCACTTATTCTACATTTCTCATGTCTCTTCACTGTCCCAGACTAGAGTCAAGCTCAA 295350359 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||| | ||||||||||| | |||||| ||| Sbjct 295350358 CAGTGCCTTCTTTCCCCACAGATTCCACCA 295350329 Score = 84.2 bits (92), Expect = 7e-14 Identities = 49/51 (96%), Gaps = 0/51 (0%) Strand=Plus/Minus Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341 ||||||||||||||||||||| | ||||||||||||||||||||||||||| Sbjct 406523388 GCTCAACAGGGTCTTCTTTCCTCACTGATTCCGCCAAGCCCGTTCCCTTGG 406523338 >seq2 Length=541556283 Score = 131 bits (144), Expect = 5e-28 Identities = 190/265 (72%), Gaps = 14/265 (5%) Strand=Plus/Minus Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303 |||||||| || | || ||| |||| | | | | ||| ||| | ||| |||| | | Sbjct 241993352 TTATTCTATACTTTTCTTGTCTCTTCATTATGCCAGGCTAAAGTTGAACTCTACAGAGCC 241993293 Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363 |||||| || ||||| |||| | || ||||| |||||||||| |||||| |||| Sbjct 241993292 TTCTTTACCTAGTGATTTTGCCAGTCTTATTTCCTTGCCTGTGGTTTC-CTAGATGGTAG 241993234 Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423 |||||| |||| ||||||| || |||||||||| | ||||||| ||| || | Sbjct 241993233 GTAGGGATAGTGAGAATCTCATTGATCCATTCATAC-----ACTAATTTGATAACAAT-- 241993181 Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483 |||| || |||||||||| |||| || | |||| || | ||| ||||||| Sbjct 241993180 ATTTTTCTGCCTTAAGAGAATCATTCTTTTTTT-----TTTAACC-CACTTCATTGAATT 241993127 Query 484 TCTTCACTTTGACATTCAGAGCACT 508 |||||||||||| ||| ||| |||| Sbjct 241993126 TCTTCACTTTGAAATTTAGAACACT 241993102 Score = 125 bits (138), Expect = 2e-26 Identities = 109/136 (80%), Gaps = 7/136 (5%) Strand=Plus/Plus Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449 ||||| |||| |||| ||||| ||||| ||| | ||||||||||||||||||| Sbjct 322623837 CCATTTATGCATGTCATTAATTGGATGAGGAGTC-------TACCTTAAGAGAGTCATAG 322623889 Query 450 TTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509 ||||||| | |||||| |||| || | ||||||| |||||||||||||||||||| Sbjct 322623890 TTACTCCTTCAATTTACCTAAGCTTCTTTCAGTTTCTTCCCTTTGACATTCAGAGCACTG 322623949 Query 510 GGCAGAAATCACATTG 525 ||||||||||||| || Sbjct 322623950 GGCAGAAATCACAGTG 322623965 Score = 102 bits (112), Expect = 3e-19 Identities = 71/81 (88%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 33 CTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCA 92 |||| |||| | ||||||||||||||||||| ||||| |||| ||| ||||||||| || Sbjct 449611625 CTCCCTGAGCTCGCCTTAGGACACCTGCGTTACGGTTTGACAGGTGTACCGCCCCAGTCA 449611566 Query 93 AACTCCCCACCTGACAATGTC 113 |||||||||||||||| |||| Sbjct 449611565 AACTCCCCACCTGACACTGTC 449611545 >seq8 Length=312544902 Score = 93.3 bits (102), Expect = 1e-16 Identities = 72/86 (84%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296 ||||||||| ||||||||||| || || ||||| | | ||||||||||||||||| Sbjct 3100299 CTCCCACTTCTTCTACACCTCCCAGGTGTCTTCACCGTGCCAGACTAGAGTCAAGCTCAG 3100358 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCC 322 ||||||||||||||||||| ||| || Sbjct 3100359 CAGGGTCTTCTTTCCCCGCGGATCCC 3100384 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635117978368