Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Monodelphis_20domestica_20[refseq_20GCF_5F000002295.2_202007-01-25]
5,016 sequences; 3,598,443,077 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq4092 477 3e-132
seq217 439 8e-121
seq5 277 6e-72
seq4 273 7e-71
seq1 253 7e-65
seq3942 250 8e-64
seq3 226 9e-57
seq2 131 5e-28
seq8 93.3 1e-16
>seq4092
Length=58290
Score = 477 bits (528), Expect = 3e-132
Identities = 284/297 (96%), Gaps = 0/297 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
|||||||||||||||||||||||| ||| ||||| | | ||||||||||||||||||
Sbjct 14050 CTCCCACTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCAA 13991
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13990 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAG 13931
Query 357 ATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATG 416
||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 13930 ATAGTAGGTAGGGACAGTGGGAATCTCGTTCATCCATTCATGCGCGTCACTAATTAGATG 13871
Query 417 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGG 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 13870 ACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTCA 13811
Query 477 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 13810 TTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 13754
Score = 122 bits (134), Expect = 3e-25
Identities = 105/129 (81%), Gaps = 6/129 (5%)
Strand=Plus/Minus
Query 7 CTTTTGCTCT-ACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTAT 65
||| ||||| || |||| ||||||| |||| |||| | |||||||||||||||||||
Sbjct 14389 CTTCTGCTCCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTAC 14330
Query 66 GGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGAT 125
||||| |||| ||| ||||||||| |||||||||||||||||| |||| ||||||
Sbjct 14329 GGTTTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC-----CCCGGAG 14275
Query 126 CGGCCCGCG 134
||| ||||
Sbjct 14274 CGGGTCGCG 14266
>seq217
Length=15910
Score = 439 bits (486), Expect = 8e-121
Identities = 284/303 (94%), Gaps = 6/303 (2%)
Strand=Plus/Plus
Query 237 CTCCCACTT-ATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295
||||||||| ||||||||||||||| ||| ||||| | | |||||||||||||||||
Sbjct 2144 CTCCCACTTTATTCTACACCTCTCATGTCTCTTCACCGTGCCAGACTAGAGTCAAGCTCA 2203
Query 296 ACAGGG-TCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 354
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2204 ACAGGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCT 2263
Query 355 AGATA-GTAGATAGGGACAGTGGG-AATCT-CGTTAATCCATTCATGCGCGTCACTAATT 411
||||| |||| ||||||||||||| ||||| |||| ||||||||||||||||||||||||
Sbjct 2264 AGATAAGTAGGTAGGGACAGTGGGGAATCTTCGTTCATCCATTCATGCGCGTCACTAATT 2323
Query 412 A-GATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 470
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2324 AAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC 2383
Query 471 GCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCA 530
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 2384 GCTTCATTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCA 2443
Query 531 ACA 533
|||
Sbjct 2444 ACA 2446
Score = 114 bits (126), Expect = 4e-23
Identities = 105/130 (81%), Gaps = 7/130 (5%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGC-GTTAT 65
||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||| ||||
Sbjct 1797 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCCGTTAC 1856
Query 66 GGTT-TAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGA 124
|||| | |||| ||| ||||||||| |||||||||||||||||| |||| ||||||
Sbjct 1857 GGTTGTGACAGGTGTACCGCCCCAGTCAAACTCCCCACCTGACACTGTC-----CCCGGA 1911
Query 125 TCGGCCCGCG 134
||| ||||
Sbjct 1912 GCGGGTCGCG 1921
>seq5
Length=304825324
Score = 277 bits (306), Expect = 6e-72
Identities = 193/218 (89%), Gaps = 1/218 (0%)
Strand=Plus/Plus
Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT- 338
|||| || |||||||||||||||||||||| || ||||||||| |||||||| ||||||
Sbjct 241188565 ACTACAGCCAAGCTCAACAGGGTCTTCTTTTCCTGCTGATTCCACCAAGCCCATTCCCTG 241188624
Query 339 TGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATG 398
||||||||||||| ||||||||||| |||||||||||| ||||||||| |||||||||||
Sbjct 241188625 TGGCTGTGGTTTCACTAGATAGTAGGTAGGGACAGTGGAAATCTCGTTCATCCATTCATG 241188684
Query 399 CGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCG 458
|| ||||||||||||||| |||| |||||| ||||||||||||||| |||||||||||
Sbjct 241188685 TGCCTCACTAATTAGATGATGAGGTATTTGGATACCTTAAGAGAGTCCTAGTTACTCCCA 241188744
Query 459 CCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGAC 496
|| ||||||| |||| ||||||||||| || |||||
Sbjct 241188745 CCATTTACCCATGCTTCATTGAATTTCTTTACCTTGAC 241188782
Score = 149 bits (164), Expect = 2e-33
Identities = 205/283 (72%), Gaps = 9/283 (3%)
Strand=Plus/Minus
Query 238 TCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297
|||| ||||| | ||||||| || |||||| | | ||||||| ||||||| ||
Sbjct 254219063 TCCCTCTTATGCCGTACCTCTCCTCTCTCTTCACAGTGCCAGACTAGAATCAAGCTAAAA 254219004
Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357
| |||||| |||| || |||| || || | || || ||||||||| ||| |||||
Sbjct 254219003 GAGTTCTTCTGTCCCGGCGAATTCAGCTAATCTCGAACCGTTGGCTGTGTCTTC-CTAGA 254218945
Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGA 417
| || ||||||||| || || || || ||||||| || |||||||| ||||||
Sbjct 254218944 ------AGAGAGACAGTGGGTATGTC-TTCATTCATTCATAAGCATCACTAATCAGATGA 254218892
Query 418 CGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGT 477
|||||||||||||||||||| | | || |||| || || ||||| | | | |
Sbjct 254218891 GGAGGCATTTGGCTACCTTAAAACAATCTCGGTTAACCCAGCTGTTTATTCAGGAGTCAT 254218832
Query 478 T-GAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATC 519
| ||| ||||||||||||| |||| |||| ||| |||||||
Sbjct 254218831 TCAAATGTCTTCACTTTGACTTTCAAAGCAGCGGGAAGAAATC 254218789
Score = 87.8 bits (96), Expect = 6e-15
Identities = 124/174 (71%), Gaps = 3/174 (2%)
Strand=Plus/Plus
Query 365 TAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCA 424
|||||||||| |||||| || ||||||| | | |||||| | |||| || |||||
Sbjct 90344440 TAGGGACAGTTAGAATCTTTTTTATCCATTTCTATGTATCACTAGTCAGATAACAAGGCA 90344499
Query 425 TTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGC---GCTTGGTTGAA 481
||| || ||||| |||||||| ||| ||| |||| || | | || ||||
Sbjct 90344500 CTTGACTCTAATAAGAAAGTCATAGATACGCCCATTGTTTGCCACCTAAGTTTCACTGAA 90344559
Query 482 TTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||| || |||||| ||| ||| ||||||||||| | || ||| ||||
Sbjct 90344560 TTTCTTTACCTTGACACATGGAGTACTAGGCAGAAATCATAATGAATCAGCATC 90344613
>seq4
Length=435153693
Score = 273 bits (302), Expect = 7e-71
Identities = 192/218 (88%), Gaps = 2/218 (1%)
Strand=Plus/Minus
Query 243 CTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGT 302
|||||||||||||||||| ||| |||||| ||| | | ||||||||||||||||||||
Sbjct 148859918 CTTATTCTACACCTCTCATGTCTCTTCACAGTGTCAGCCGAGAGTCAAGCTCAACAGGGT 148859859
Query 303 CTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTA 362
||||||||||||||||||| |||||| |||||||||||||| ||||||||| ||||||||
Sbjct 148859858 CTTCTTTCCCCGCTGATTCTGCCAAGTCCGTTCCCTTGGCTCTGGTTTCGCCAGATAGTA 148859799
Query 363 GATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGG 422
| ||||||||||||||||| || ||| ||||| | | |||||||||||| ||||||||
Sbjct 148859798 AGTTGGGACAGTGGGAATCTCATTCATCTATTCAAGTGTGTCACTAATTAGGTGACGAGG 148859739
Query 423 CATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460
||||||||||| ||||||||||| ||||||||| |||
Sbjct 148859738 CATTTGGCTACTTTAAGAGAGTC--AGTTACTCCTGCC 148859703
Score = 109 bits (120), Expect = 2e-21
Identities = 93/115 (81%), Gaps = 5/115 (4%)
Strand=Plus/Minus
Query 20 GGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGT 79
|||| ||||||| |||| |||| | ||||||||||||||||||| ||||| |||| |||
Sbjct 74351609 GGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTACGGTTTGACAGGTGT 74351550
Query 80 GCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATCGGCCCGCG 134
||||| ||| |||| ||||||||||||| |||| |||||| ||| ||||
Sbjct 74351549 ACCGCCACAGTCAAATTCCCCACCTGACACTGTC-----CCCGGAGCGGGTCGCG 74351500
Score = 84.2 bits (92), Expect = 7e-14
Identities = 67/81 (83%), Gaps = 0/81 (0%)
Strand=Plus/Plus
Query 307 TTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATA 366
||| ||| ||||||| |||||||| |||||||||||||||||| ||||||||||| |
Sbjct 280817315 TTTTCCCACTGATTCTACCAAGCCCATTCCCTTGGCTGTGGTTTTCCTAGATAGTAGGTG 280817374
Query 367 GGGACAGTGGGAATCTCGTTA 387
| |||| | | |||||| |||
Sbjct 280817375 GAGACAATTGAAATCTCATTA 280817395
>seq1
Length=748055161
Score = 253 bits (280), Expect = 7e-65
Identities = 211/256 (82%), Gaps = 3/256 (1%)
Strand=Plus/Plus
Query 279 GACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCT 338
||||||||||||| ||| ||||||||||||||||| ||||||| ||||||| | || |||
Sbjct 348322400 GACTAGAGTCAAGTTCAGCAGGGTCTTCTTTCCCCACTGATTCTGCCAAGCTCATTACCT 348322459
Query 339 TGGCTGTGGTTT-CGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCAT 397
|| ||||||| | |||||| ||| | ||| ||||| || || ||| ||||| ||||
Sbjct 348322460 GAGCGGTGGTTTTCACTAGAT--TAGGTCCGGATAGTGGAAAACTTGTTCATCCAATCAT 348322517
Query 398 GCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCC 457
|| ||||||||||||||| |||||||||||||||||||||||||| ||||||| |||
Sbjct 348322518 GCATATCACTAATTAGATGATGAGGCATTTGGCTACCTTAAGAGAGTAATAGTTATTCCT 348322577
Query 458 GCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAA 517
||| ||||| | ||| |||||||||||||||||||| || | |||| |||| |||||
Sbjct 348322578 GCCATTTACTCATGCTCCATTGAATTTCTTCACTTTGACCTTTAAAGCATTGGGAAGAAA 348322637
Query 518 TCACATTGCGTCAACA 533
||| |||| |||| ||
Sbjct 348322638 TCATATTGTGTCATCA 348322653
Score = 174 bits (192), Expect = 5e-41
Identities = 153/185 (83%), Gaps = 8/185 (4%)
Strand=Plus/Minus
Query 280 ACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTT 339
|||| |||||| ||||||||||||||||||| || || | | |||| ||| |||| |||
Sbjct 379474825 ACTA-AGTCAAACTCAACAGGGTCTTCTTTCACCACTAACTTTGCCACGCCTGTTCTCTT 379474767
Query 340 GGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGC 399
|| |||||||| |||| ||||||| ||||||||||| |||||| ||| ||||||||| |
Sbjct 379474766 GGTTGTGGTTTTGCTAAATAGTAGGTAGGGACAGTGAGAATCTTGTTCATCCATTCA--C 379474709
Query 400 GCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGC 459
|||||||||||||| || |||||||| ||| |||| |||||||||||||||| | |
Sbjct 379474708 ATGTCACTAATTAGATAACAAGGCATTT-GCT--CTTA--AGAGTCATAGTTACTCTCAC 379474654
Query 460 CGTTT 464
| |||
Sbjct 379474653 CATTT 379474649
Score = 116 bits (128), Expect = 1e-23
Identities = 107/133 (80%), Gaps = 2/133 (2%)
Strand=Plus/Plus
Query 402 GTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCG 461
|||| |||||||||| | ||||||| |||| ||| |||| ||||||| || || || | |
Sbjct 715337154 GTCATTAATTAGATGTCAAGGCATT-GGCTCCCTCAAGAAAGTCATAATTCCTTCCACTG 715337212
Query 462 TTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGC-ACTGGGCAGAAATCA 520
|||||| | || |||||||||||||||||| ||||||||| | | || ||||||||
Sbjct 715337213 TTTACCTTCATTTCACTGAATTTCTTCACTTTGATATTCAGAGCAAGTAGGAAGAAATCA 715337272
Query 521 CATTGCGTCAACA 533
||||| ||||||
Sbjct 715337273 CATTGTTTCAACA 715337285
Score = 104 bits (114), Expect = 8e-20
Identities = 87/107 (81%), Gaps = 0/107 (0%)
Strand=Plus/Plus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| | |||| ||||||| |||| |||| | ||||||||||| ||| ||| |
Sbjct 708294093 CTTCTGCTCCATGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACTTGCATTACG 708294152
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| ||| | ||||||| |||||||||||||||| | ||||
Sbjct 708294153 GTTTGACAGGTGTACTGCCCCAGTCAAACTCCCCACCTGATACTGTC 708294199
Score = 96.9 bits (106), Expect = 1e-17
Identities = 85/106 (80%), Gaps = 0/106 (0%)
Strand=Plus/Minus
Query 430 CTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCA 489
|| ||| || |||||||||||||||| | ||| | | || || ||||||||||||
Sbjct 715311911 CTCCCTCAACAGAGTCATAGTTACTCTCCTAGTTCATCTGCATTTCACTGAATTTCTTCA 715311852
Query 490 CTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535
|||||||||||| || |||||| |||||||| | || |||||||||
Sbjct 715311851 CTTTGACATTCAAAGAACTGGGAAGAAATCAAACTGTGTCAACATC 715311806
Score = 82.4 bits (90), Expect = 2e-13
Identities = 57/65 (88%), Gaps = 0/65 (0%)
Strand=Plus/Plus
Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446
||| |||||||| | |||||||||||||||| ||| |||||| ||||||||||||| | |
Sbjct 117108784 AATTCATTCATGTGGGTCACTAATTAGATGATGAGACATTTGCCTACCTTAAGAGAATTA 117108843
Query 447 TAGTT 451
|||||
Sbjct 117108844 TAGTT 117108848
>seq3942
Length=472507
Score = 250 bits (276), Expect = 8e-64
Identities = 159/173 (92%), Gaps = 0/173 (0%)
Strand=Plus/Minus
Query 361 TAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGA 420
||||| |||||||||||||||| || |||||||||||| ||||||||||||||||| |
Sbjct 180680 TAGATCAGGACAGTGGGAATCTCTTTCATCCATTCATGCATGTCACTAATTAGATGACTA 180621
Query 421 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGA 480
|||||||||||||||||||||||||||||||||||| || ||||||| || ||| ||||
Sbjct 180620 GGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCTGCTGTTTACCTGCTCTTCATTGA 180561
Query 481 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533
||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 180560 ATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATCGCGTCAACA 180508
>seq3
Length=527952102
Score = 226 bits (250), Expect = 9e-57
Identities = 180/214 (84%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 329 CCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAA 388
||| ||| |||| |||||||||| ||||| ||||| |||||||| ||| |||||| || |
Sbjct 460671978 CCCATTCTCTTGACTGTGGTTTCACTAGACAGTAGGTAGGGACAATGGAAATCTCATTCA 460671919
Query 389 TCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATA 448
||||||||||| ||||||||||| |||| |||||||||| || |||||||||||| |||
Sbjct 460671918 TCCATTCATGCATGTCACTAATTATATGATGAGGCATTTGACTTCCTTAAGAGAGTTATA 460671859
Query 449 GTTACTCCCGCCGTTTACCCGCGCTTGGTTGAA-TTTCTTCACTTTGACATTCAGAGCAC 507
||||||||| || ||||| | |||| ||||| ||| ||||||||| ||||||||||||
Sbjct 460671858 GTTACTCCCACCTATTACCTGTGCTTCATTGAATTTTATTCACTTTGGCATTCAGAGCAC 460671799
Query 508 TGGGCAGAAATCACATTGCGTCAACA-TCACTTT 540
||| | ||||||||| | |||||| |||||||
Sbjct 460671798 TGGAGAAAAATCACATCCCATCAACACTCACTTT 460671765
Score = 174 bits (192), Expect = 5e-41
Identities = 129/150 (86%), Gaps = 2/150 (1%)
Strand=Plus/Plus
Query 292 CTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTC 351
|||||||| ||||||||||| |||||||| | ||||| |||||||||||||||||||
Sbjct 314874483 CTCAACAG--TCTTCTTTCCCTTCTGATTCCACTAAGCCTGTTCCCTTGGCTGTGGTTTT 314874540
Query 352 GCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT 411
||||||||||||||||||||||||| |||||| || || |||||||| | ||||||||
Sbjct 314874541 GCTAGATAGTAGATAGGGACAGTGGAAATCTCATTTATACATTCATGAACACCACTAATT 314874600
Query 412 AGATGACGAGGCATTTGGCTACCTTAAGAG 441
||||||| | | |||||| ||||||||||
Sbjct 314874601 AGATGACAAAACGTTTGGCAACCTTAAGAG 314874630
Score = 116 bits (128), Expect = 1e-23
Identities = 90/107 (84%), Gaps = 0/107 (0%)
Strand=Plus/Minus
Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66
||| ||||| || |||| ||||||| |||| |||| | ||||||||||||||||||| |
Sbjct 422599389 CTTCTGCTCCACGGGAGGTTTCTGTCCTCCCTGAGCTCGCCTTAGGACACCTGCGTTAGG 422599330
Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTC 113
|||| |||| || || || ||| |||||||||||||||||||||||
Sbjct 422599329 GTTTGACAGGCGTACCTCCTCAGTCAAACTCCCCACCTGACAATGTC 422599283
Score = 111 bits (122), Expect = 5e-22
Identities = 79/91 (87%), Gaps = 0/91 (0%)
Strand=Plus/Minus
Query 443 GTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAG 502
||||||||||||| ||| |||||| || ||| ||||||||||||||||||| ||||||
Sbjct 286398782 GTCATAGTTACTCTTGCCATTTACCTGCACTTCCTTGAATTTCTTCACTTTGATATTCAG 286398723
Query 503 AGCACTGGGCAGAAATCACATTGCGTCAACA 533
|||||||||||||||||| || |||||||
Sbjct 286398722 AGCACTGGGCAGAAATCATATCTTGTCAACA 286398692
Score = 105 bits (116), Expect = 2e-20
Identities = 87/105 (83%), Gaps = 1/105 (1%)
Strand=Plus/Plus
Query 403 TCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGT 462
||||| ||||| | | ||||||||||||| | |||| ||||||||||||| ||| ||| |
Sbjct 312820844 TCACTCATTAGGTAATGAGGCATTTGGCTGCTTTAAAAGAGTCATAGTTATTCCTGCCTT 312820903
Query 463 TTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||| | | |||| |||||||||| ||||||||||||||||||
Sbjct 312820904 TTAACAG-GCTTCATTGAATTTCTCAGCTTTGACATTCAGAGCAC 312820947
Score = 96.9 bits (106), Expect = 1e-17
Identities = 117/156 (75%), Gaps = 5/156 (3%)
Strand=Plus/Plus
Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428
|||||||| ||||| || ||| | ||||| || ||||||||| |||| |||||||||
Sbjct 503138560 GACAGTGGAGATCTCATTCATCTAGTCATGTGCACCACTAATTAAATGATAAGGCATTTG 503138619
Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488
|||| |||||| | || ||||| | | | ||| || | || |||| || || |||
Sbjct 503138620 GCTAGCTTAAGCAACTC--AGTTAATTCTGTTGTTGACGTGTCCTAGGTT-AAGTTTTTC 503138676
Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACATT 524
||||||| ||| ||| || | |||||||||| |||
Sbjct 503138677 ACTTTGAAATT--GAGAACAGAGCAGAAATCATATT 503138710
Score = 91.5 bits (100), Expect = 5e-16
Identities = 74/90 (82%), Gaps = 0/90 (0%)
Strand=Plus/Minus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||||||||||| ||||| ||| ||||| | ||||||||||||||||||
Sbjct 295350418 CTCCCACTTATTCTACATTTCTCATGTCTCTTCACTGTCCCAGACTAGAGTCAAGCTCAA 295350359
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326
||| | ||||||||||| | |||||| |||
Sbjct 295350358 CAGTGCCTTCTTTCCCCACAGATTCCACCA 295350329
Score = 84.2 bits (92), Expect = 7e-14
Identities = 49/51 (96%), Gaps = 0/51 (0%)
Strand=Plus/Minus
Query 291 GCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGG 341
||||||||||||||||||||| | |||||||||||||||||||||||||||
Sbjct 406523388 GCTCAACAGGGTCTTCTTTCCTCACTGATTCCGCCAAGCCCGTTCCCTTGG 406523338
>seq2
Length=541556283
Score = 131 bits (144), Expect = 5e-28
Identities = 190/265 (72%), Gaps = 14/265 (5%)
Strand=Plus/Minus
Query 244 TTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTC 303
|||||||| || | || ||| |||| | | | | ||| ||| | ||| |||| | |
Sbjct 241993352 TTATTCTATACTTTTCTTGTCTCTTCATTATGCCAGGCTAAAGTTGAACTCTACAGAGCC 241993293
Query 304 TTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAG 363
|||||| || ||||| |||| | || ||||| |||||||||| |||||| ||||
Sbjct 241993292 TTCTTTACCTAGTGATTTTGCCAGTCTTATTTCCTTGCCTGTGGTTTC-CTAGATGGTAG 241993234
Query 364 ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGC 423
|||||| |||| ||||||| || |||||||||| | ||||||| ||| || |
Sbjct 241993233 GTAGGGATAGTGAGAATCTCATTGATCCATTCATAC-----ACTAATTTGATAACAAT-- 241993181
Query 424 ATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATT 483
|||| || |||||||||| |||| || | |||| || | ||| |||||||
Sbjct 241993180 ATTTTTCTGCCTTAAGAGAATCATTCTTTTTTT-----TTTAACC-CACTTCATTGAATT 241993127
Query 484 TCTTCACTTTGACATTCAGAGCACT 508
|||||||||||| ||| ||| ||||
Sbjct 241993126 TCTTCACTTTGAAATTTAGAACACT 241993102
Score = 125 bits (138), Expect = 2e-26
Identities = 109/136 (80%), Gaps = 7/136 (5%)
Strand=Plus/Plus
Query 390 CCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAG 449
||||| |||| |||| ||||| ||||| ||| | |||||||||||||||||||
Sbjct 322623837 CCATTTATGCATGTCATTAATTGGATGAGGAGTC-------TACCTTAAGAGAGTCATAG 322623889
Query 450 TTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTG 509
||||||| | |||||| |||| || | ||||||| ||||||||||||||||||||
Sbjct 322623890 TTACTCCTTCAATTTACCTAAGCTTCTTTCAGTTTCTTCCCTTTGACATTCAGAGCACTG 322623949
Query 510 GGCAGAAATCACATTG 525
||||||||||||| ||
Sbjct 322623950 GGCAGAAATCACAGTG 322623965
Score = 102 bits (112), Expect = 3e-19
Identities = 71/81 (88%), Gaps = 0/81 (0%)
Strand=Plus/Minus
Query 33 CTCCATGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCA 92
|||| |||| | ||||||||||||||||||| ||||| |||| ||| ||||||||| ||
Sbjct 449611625 CTCCCTGAGCTCGCCTTAGGACACCTGCGTTACGGTTTGACAGGTGTACCGCCCCAGTCA 449611566
Query 93 AACTCCCCACCTGACAATGTC 113
|||||||||||||||| ||||
Sbjct 449611565 AACTCCCCACCTGACACTGTC 449611545
>seq8
Length=312544902
Score = 93.3 bits (102), Expect = 1e-16
Identities = 72/86 (84%), Gaps = 0/86 (0%)
Strand=Plus/Plus
Query 237 CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAA 296
||||||||| ||||||||||| || || ||||| | | |||||||||||||||||
Sbjct 3100299 CTCCCACTTCTTCTACACCTCCCAGGTGTCTTCACCGTGCCAGACTAGAGTCAAGCTCAG 3100358
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCC 322
||||||||||||||||||| ||| ||
Sbjct 3100359 CAGGGTCTTCTTTCCCCGCGGATCCC 3100384
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635117978368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |