Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Notamacropus_20eugenii_20[genbank_20GCA_5F000004035.1_202009-11-06] 277,711 sequences; 3,075,184,024 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq92824 197 1e-45 seq100634 87.8 1e-12 seq24704 87.8 1e-12 >seq92824 Length=186084 Score = 197 bits (218), Expect = 1e-45 Identities = 473/711 (67%), Gaps = 11/711 (2%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 |||||||| || || ||||| | |||||||| |||| | || ||||||| |||||| Sbjct 146654 GAGAATCCCCGGCGCTTCGTCATCTTCCCCATTCAGTACCATGACATTTGGCACATGTAT 146595 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGTCGATTTGTCCAAAGACATGAAT 61161 || || || || || ||||||||||||| |||||||| ||| | || || || || | Sbjct 146594 AAGAAAGCAGAGGCCTCCTTCTGGACGGCTGAGGAGGTGGATCTCTCTAAGGATATTCAG 146535 Query 61162 GACTGGGAGCGTTT--ATCGAGCGGTGAACAACATTTCATTAAACATGTGTTGGCGTTCT 61219 ||||||| | | | | || ||| || ||||| || | ||| || |||| Sbjct 146534 CACTGGGAAACACTGAAGCCTGAGGAGAAATAC--TTCATATCTCACGAGTTAGCTTTCT 146477 Query 61220 TTGCCGCTTCGGACGGTATCGTCAATGAGAATTTATTGGAACGTTTCGCGCAGGAGGTGC 61279 |||| || || || || || ||||| ||||| |||| || ||| || || || | Sbjct 146476 TTGCAGCAAGTGATGGCATAGTAAATGAAAATTTGGTGGAGCGGTTCAGCCAAGAAGTAC 146417 Query 61280 AAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGATTGCCATGGAGAATGTCCACTCGG 61339 | ||| | || || || |||||||| |||||||| ||||| ||||| || | || || | Sbjct 146416 AGGTGACTGAAGCTCGCTGTTTCTATGGCTTCCAAATTGCTATGGAAAACATACATTCTG 146357 Query 61340 AGATGTACAGTGTTCTCATCGATACGTACATCAGGGAGCGGGCGGAACGTGAACGATTGT 61399 | ||||| ||| | || || || || || || | ||| | ||| | ||| | | Sbjct 146356 AAATGTATAGTCTCCTTATTGACACTTATATTAAGGACCCCAAAGAAAGAGAATTTCTCT 146297 Query 61400 TCAATGCCATCGAGACGATACCGGCGGTGAAGCGGAAAGCGGATTGGGCCTTCAATTGGA 61459 |||||||||| || ||| | || || || |||||| || |||||||| |||| Sbjct 146296 TCAATGCCATTGAAACGCTGCCTTGTGTTAAAAAGAAAGCTGACTGGGCCTTGCGGTGGA 146237 Query 61460 TCACCAGTACAACG--GCTACATTTGGTGAACGATTGCTGGCATTTGCGGTGGTCGAGGG 61517 | | ||| | || |||| ||||||||| | | || ||||||| || || || Sbjct 146236 T--TGGGGACAGAGAAGCAACATATGGTGAACGTGTTGTAGCTTTTGCGGCTGTTGAAGG 146179 Query 61518 TGTATTTTTCAGTGGATCGTTTGCCGCAATCTTTTGGTTGAAGAAACGTGGACTTATGCC 61577 | || || ||| || ||||| | || || ||| | |||||||| || | ||||| Sbjct 146178 AATCTTCTTTTCTGGTTCTTTTGCATCCATATTCTGGCTCAAGAAACGAGGTTTAATGCC 146119 Query 61578 CGGTCTGACCTTCAGCAATGAGTTGATATCACGCGACGAGGGCATGCATTGTGATTTTGC 61637 || | || || |||||| | || | || ||||| |||| ||||||||||| Sbjct 146118 TGGGTTAACTTTTTCCAATGAACTTATTAGTAGAGATGAGGGTTTGCACTGTGATTTTGC 146059 Query 61638 TGTTTTGCTATTCAAACGCTATCTGGTGAATCGTCCGTCGGAGGAGCGTGTGGGTGAGAT 61697 ||| | ||||||| | ||||| | || || | || || || || Sbjct 146058 CTGTTTAATGTTCAAAC---ACCTGGTACACAAGCCTTCAGCAGAAAAAGTAAAGGAAAT 146002 Query 61698 TGTTCGTGAGGCGGTAACTATCGAACAGGAATTTCTGACTGACGCTTTGCC 61748 | | | || || | || |||||||||||| ||||||| |||||||| Sbjct 146001 TATCATCAATGCTGTTAGAATAGAACAGGAATTTTTGACTGAAGCTTTGCC 145951 >seq100634 Length=30925 Score = 87.8 bits (96), Expect = 1e-12 Identities = 109/146 (75%), Gaps = 4/146 (3%) Strand=Plus/Plus Query 66326 TGTTCT--ACACGACGCATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTG 66383 |||||| ||||| |||||| ||||| || ||||||||||| | || ||||| | | Sbjct 12742 TGTTCTCCACACGTTTCATAAAGAGATCCGGGATCCAGAGGGCAAAAAAAAGATCCCTGG 12801 Query 66384 CTCGTTGCTCCTCAATGCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCA 66442 |||| ||||| || | || ||| || || || ||| ||||| |||||||| || Sbjct 12802 CTCGCTGCTCTTCCTTCCCAGTG-TTCTTCTTCAGGTCAAGGAATTCAAAGATATCTAAG 12860 Query 66443 TGCCATGGTTCCAGGTAGATGGCGAA 66468 |||||||| |||| ||||||||| || Sbjct 12861 TGCCATGGCTCCAAGTAGATGGCAAA 12886 >seq24704 Length=62651 Score = 87.8 bits (96), Expect = 1e-12 Identities = 78/98 (80%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 |||||||| || |||||||| | |||||||| |||| | || ||||||| |||||| Sbjct 5450 GAGAATCCCCGGCGTTTCGTCATCTTCCCCATTCAGTACCATGACATTTGGCACATGTAT 5509 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || || || || || ||||||||||||| |||||||| Sbjct 5510 AAGAAAGCAGAGGCCTCCTTCTGGACGGCTGAGGAGGT 5547 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396222390229040