Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq31 107 3e-21 >seq31 Length=20058087 Score = 107 bits (118), Expect = 3e-21 Identities = 166/229 (72%), Gaps = 6/229 (3%) Strand=Plus/Minus Query 7 AGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTT 66 ||||||||||| || ||||||| ||||| ||||| | | || ||||||||| | ||| Sbjct 736718 AGGGCAGGGACTTAATCAACGCAAGCTT-ATGACCCACATTTGAAAGGAATTTCTT-GTT 736661 Query 67 GAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGG 125 | | || ||||||||| | |||||||||| || |||| | ||||| | Sbjct 736660 CATGGGGAATAATTGCAATCCCCAATCCCCATCAGGAATGGGGTTCAGTGGGTTACCTGT 736601 Query 126 ACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGCGTGCGGCCCA 184 |||| | | ||| || | | | ||| ||| ||||||||||||| | | |||| Sbjct 736600 GCCTGCCTGTGTAGGGGAGACATACACTGAG-ACAGTCAGTGTAGCGCGTGCACAGCCCC 736542 Query 185 GAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 | |||||||||||||||||||||||||||||| ||||| || ||||| Sbjct 736541 GGACATCTAAGGGCATCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 736494 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751986114790