Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq152 116 7e-24 >seq152 Length=7886015 Score = 116 bits (128), Expect = 7e-24 Identities = 166/227 (73%), Gaps = 14/227 (6%) Strand=Plus/Minus Query 93 AGTGTTCAAAGCAGGCCTTTG-CTCGAA--TACATTAGCATGGAATAATAGAATAGGACG 149 ||||||||| |||| ||| | ||| | ||| ||| |||||||| ||||||||| Sbjct 7410111 AGTGTTCAA-GCAGACCTAAGTCTCCTAGATACCCCAGCTAGGAATAATGGAATAGGACC 7410053 Query 150 TGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 |||||||||||||||||||| | || | | |||||||| | ||| || | |||| Sbjct 7410052 C-CGGTTCTATTTTGTTGGTTTTCGGAACTGGGGCCATGATTAAGAAGGACAGCCAGGGG 7409994 Query 210 TGTCAGTATT----CAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACT 265 ||| |||| |||| |||||||||||||||||| ||||| || | Sbjct 7409993 TGTTCATATTATGCCAAT----AGAGGTGAAATTCTTGGACCGGCGCAAGACGGACCAGA 7409938 Query 266 GCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 |||||||| || ||||| |||||||||||||||| |||||||||| Sbjct 7409937 GCGAAAGCATTTGCCAAGAATGTTTTCATTAATCA-AGAACGAAAGT 7409892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915182556288