Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq5 138 5e-30
seq131 91.5 6e-16
>seq5
Length=36077823
Score = 138 bits (152), Expect = 5e-30
Identities = 99/114 (87%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629
|||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||
Sbjct 35881032 GACCTGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAG 35881091
Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 35881092 GTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 35881145
>seq131
Length=8971046
Score = 91.5 bits (100), Expect = 6e-16
Identities = 110/150 (73%), Gaps = 0/150 (0%)
Strand=Plus/Plus
Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106
|||| ||||||||||||| | || ||| |||||| | | | ||| | ||| | ||
Sbjct 5979502 GTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATATAAGGTTAATTTCCAGCA 5979561
Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166
||||||||||| ||||||| || | ||||| ||||||| |||||| | |||||||
Sbjct 5979562 CGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGT 5979621
Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAA 196
| || || | ||||| | |||| ||| ||
Sbjct 5979622 TCAAGAGGGCTTGAAAGTATTGAGAGGTAA 5979651
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079959116300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |