Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq5 138 5e-30 seq131 91.5 6e-16 >seq5 Length=36077823 Score = 138 bits (152), Expect = 5e-30 Identities = 99/114 (87%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 570 GACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAG 629 |||| |||||||||||||||||||||| |||| ||||||||||||||||||||||||| Sbjct 35881032 GACCTGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTGGTGGAG 35881091 Query 630 GCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683 | || |||||| ||| ||||||||||| ||||| | ||||||||||||||| Sbjct 35881092 GTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 35881145 >seq131 Length=8971046 Score = 91.5 bits (100), Expect = 6e-16 Identities = 110/150 (73%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 47 GTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCC 106 |||| ||||||||||||| | || ||| |||||| | | | ||| | ||| | || Sbjct 5979502 GTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATATAAGGTTAATTTCCAGCA 5979561 Query 107 AGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGT 166 ||||||||||| ||||||| || | ||||| ||||||| |||||| | ||||||| Sbjct 5979562 CGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGT 5979621 Query 167 TAAAAAGCACGTGAAATTGTTGAAAGGGAA 196 | || || | ||||| | |||| ||| || Sbjct 5979622 TCAAGAGGGCTTGAAAGTATTGAGAGGTAA 5979651 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079959116300