Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq31 122 2e-25 >seq31 Length=20058087 Score = 122 bits (134), Expect = 2e-25 Identities = 181/253 (72%), Gaps = 3/253 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 736468 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 736525 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | |||| | | |||||||||||||| | || | | || Sbjct 736526 ATGCCCTTAGATGTCCGGGGCTGTGCACGCGCTACACTGACTGTCTCAGTGTATGTCTCC 736585 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| | || ||| ||||| | | || | | || || ||||||| | | |||| Sbjct 736586 CCTACACAGGCAGGCACAGGTAACCCACTGAACCCCATTCCTGATGGGGATTGGGGATTG 736645 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 |||||||| | | | ||| || ||| ||| || | | ||||| ||| ||||||||| Sbjct 736646 CAATTATTCCCCATGAACAAGAAATTCCTTTCAAATGTGGGTCATAAGCTTGCGTTGATT 736705 Query 311 ACGTCCCTGCCCT 323 | ||||||||||| Sbjct 736706 AAGTCCCTGCCCT 736718 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 947181946368