Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04-
18] 1,906 sequences; 3,192,565,135 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq31 122 2e-25
>seq31
Length=20058087
Score = 122 bits (134), Expect = 2e-25
Identities = 181/253 (72%), Gaps = 3/253 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 736468 CTTCTTAGAGGGACAAGTGGCGTTCAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 736525
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | |||| | | |||||||||||||| | || | | ||
Sbjct 736526 ATGCCCTTAGATGTCCGGGGCTGTGCACGCGCTACACTGACTGTCTCAGTGTATGTCTCC 736585
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| | || ||| ||||| | | || | | || || ||||||| | | ||||
Sbjct 736586 CCTACACAGGCAGGCACAGGTAACCCACTGAACCCCATTCCTGATGGGGATTGGGGATTG 736645
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
|||||||| | | | ||| || ||| ||| || | | ||||| ||| |||||||||
Sbjct 736646 CAATTATTCCCCATGAACAAGAAATTCCTTTCAAATGTGGGTCATAAGCTTGCGTTGATT 736705
Query 311 ACGTCCCTGCCCT 323
| |||||||||||
Sbjct 736706 AAGTCCCTGCCCT 736718
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 947181946368
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |