Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Phascolarctos_20cinereus_20[genbank_20GCA_5F002099425.1_202017-04- 18] 1,906 sequences; 3,192,565,135 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq179 91.5 1e-13 >seq179 Length=6459238 Score = 91.5 bits (100), Expect = 1e-13 Identities = 106/143 (74%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 66050 GTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTGA 66109 |||||||| || || || ||||||| ||| ||||| ||||| |||| ||||| ||| Sbjct 3627937 GTATACTCTACTATCTCTGTGCACAAATTGCTGCATTTGATGGTTCCCAGGTTCTGCTGA 3627996 Query 66110 TTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTGG 66169 || || || ||||| || || ||||| | |||||| || || || ||||| || Sbjct 3627997 TTGCTTTTCCGATTACAGCTGTCTTTGTAGAGCATGTAAGGGGTCCCTGTCTCCGTCTGA 3628056 Query 66170 GACTCAATGATGGCGTGCCAAAG 66192 |||||||||||||| | ||| || Sbjct 3628057 GACTCAATGATGGCATACCACAG 3628079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397558764743840