Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17]
35,974 sequences; 3,174,693,010 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq27352 80.6 1e-13
seq33194 77.0 2e-12
>seq27352
Length=51001
Score = 80.6 bits (88), Expect = 1e-13
Identities = 88/117 (75%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||||| |||| | ||| |||| | |||||| ||||| | |
Sbjct 40066 GAACCCAAAGACTTTGGTTTCCCAGAAGCTGCCTGGTGAGTCATGGGAATAACTCCATCG 40125
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||| |||||| |||| |||| ||| |||||||||||||||||||||||| ||
Sbjct 40126 GATTGCTAGTCAGCATCTTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTTGA 40182
>seq33194
Length=1326746
Score = 77.0 bits (84), Expect = 2e-12
Identities = 77/100 (77%), Gaps = 0/100 (0%)
Strand=Plus/Minus
Query 18 TTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCCGATCCCTAGTCGGCATA 77
|||| || ||| |||| ||| |||| ||||| |||| |||| |||||||||||
Sbjct 717783 TTTCCCGGAAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCGGATCGCTAGTCGGCATC 717724
Query 78 GTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
||||| ||| | |||||||||||||||| ||||||||
Sbjct 717723 GTTTATGGTCGGAAATACGACGGTATCTGATGGTCTTCGA 717684
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278306107860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |