Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17]
35,974 sequences; 3,174,693,010 total letters
Query= AAMG01000278.1
Length=318
Score E
Sequences producing significant alignments: (Bits) Value
seq30334 104 4e-20
>seq30334
Length=1513675
Score = 104 bits (114), Expect = 4e-20
Identities = 130/175 (74%), Gaps = 5/175 (3%)
Strand=Plus/Minus
Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97
|||| ||| ||| |||| | | || ||| | | ||||||||||||||||||||||||
Sbjct 1238515 ATGCTCTTAGCTGAGTGTCCTGCGGGGCCCAAAGCATTTACTTTGAAAAAATTAGAGTGT 1238456
Query 98 TCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154
||||||||| || |||| | ||| ||| |||||||| ||| ||||| |
Sbjct 1238455 TCAAAGCAGTCCCGAGTTGCCTGGTTACCCCAGCTAGGAATAATGGAAAAGGAC-CACAA 1238397
Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209
||||||||||||||||| || || | | |||||||| |||||| | ||||||
Sbjct 1238396 TTCTATTTTGTTGGTTTTCAGAACTGGGGCCATGATTAAGAGGGATGGCCGGGGG 1238342
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 914870765952
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |