Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq30334 104 4e-20 >seq30334 Length=1513675 Score = 104 bits (114), Expect = 4e-20 Identities = 130/175 (74%), Gaps = 5/175 (3%) Strand=Plus/Minus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| ||| |||| | | || ||| | | |||||||||||||||||||||||| Sbjct 1238515 ATGCTCTTAGCTGAGTGTCCTGCGGGGCCCAAAGCATTTACTTTGAAAAAATTAGAGTGT 1238456 Query 98 TCAAAGCAGGCC---TTTGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGG 154 ||||||||| || |||| | ||| ||| |||||||| ||| ||||| | Sbjct 1238455 TCAAAGCAGTCCCGAGTTGCCTGGTTACCCCAGCTAGGAATAATGGAAAAGGAC-CACAA 1238397 Query 155 TTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGG 209 ||||||||||||||||| || || | | |||||||| |||||| | |||||| Sbjct 1238396 TTCTATTTTGTTGGTTTTCAGAACTGGGGCCATGATTAAGAGGGATGGCCGGGGG 1238342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914870765952