Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq23127 140 1e-31 seq7851 109 3e-22 seq27242 107 9e-22 seq6822 102 4e-20 >seq23127 Length=25996 Score = 140 bits (154), Expect = 1e-31 Identities = 92/102 (90%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| ||| Sbjct 23725 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAGCAGGAAAGCGCCGAGCA 23666 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 |||||||||||||| ||||||||||| ||| |||| ||| || Sbjct 23665 CCGAATCCCCGCCCTGCGGTGGGGCGGGGGCCATGGGGCATA 23624 >seq7851 Length=53488 Score = 109 bits (120), Expect = 3e-22 Identities = 75/85 (88%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| | Sbjct 22767 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACAGGGAGTGAACAGGGAAGAGCCCAGTG 22826 Query 61 CCGAATCCCCGCCCCGCGGTGGGGC 85 | ||||||| || | |||| ||| Sbjct 22827 CTAAATCCCCTCCTCATGGTGAGGC 22851 >seq27242 Length=2599403 Score = 107 bits (118), Expect = 9e-22 Identities = 62/64 (97%), Gaps = 0/64 (0%) Strand=Plus/Minus Query 39 GTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98 ||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| Sbjct 1767228 GTGAACAGGGAAGAGCCCAGCGCCGAATCCCTGCCCCGCGGTGGGGCGCGGGCCATGTGG 1767169 Query 99 CGTA 102 |||| Sbjct 1767168 CGTA 1767165 >seq6822 Length=236664 Score = 102 bits (112), Expect = 4e-20 Identities = 85/103 (83%), Gaps = 1/103 (1%) Strand=Plus/Plus Query 1 GGAAAAGAAA-CTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59 |||||| ||| |||||||||||||||||||||| || || |||||||||||||||||| Sbjct 86889 GGAAAACAAAACTAACCAGGATTCCCTCAGTAATGGTGAATGAACAGGGAAGAGCCCAAT 86948 Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 || ||| ||| | ||| |||||||| ||| ||| |||| || Sbjct 86949 GCTTAATTCCCACTCCGTGGTGGGGCATGGGCCATATGGCATA 86991 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230322296160