Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17]
35,974 sequences; 3,174,693,010 total letters
Query= AAMG01000750.1
Length=102
Score E
Sequences producing significant alignments: (Bits) Value
seq23127 140 1e-31
seq7851 109 3e-22
seq27242 107 9e-22
seq6822 102 4e-20
>seq23127
Length=25996
Score = 140 bits (154), Expect = 1e-31
Identities = 92/102 (90%), Gaps = 0/102 (0%)
Strand=Plus/Minus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
|||||||||||||||||||||||||||||||||||||||||| |||| ||| ||| |||
Sbjct 23725 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAGCAGGAAAGCGCCGAGCA 23666
Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|||||||||||||| ||||||||||| ||| |||| ||| ||
Sbjct 23665 CCGAATCCCCGCCCTGCGGTGGGGCGGGGGCCATGGGGCATA 23624
>seq7851
Length=53488
Score = 109 bits (120), Expect = 3e-22
Identities = 75/85 (88%), Gaps = 0/85 (0%)
Strand=Plus/Plus
Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||| |
Sbjct 22767 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACAGGGAGTGAACAGGGAAGAGCCCAGTG 22826
Query 61 CCGAATCCCCGCCCCGCGGTGGGGC 85
| ||||||| || | |||| |||
Sbjct 22827 CTAAATCCCCTCCTCATGGTGAGGC 22851
>seq27242
Length=2599403
Score = 107 bits (118), Expect = 9e-22
Identities = 62/64 (97%), Gaps = 0/64 (0%)
Strand=Plus/Minus
Query 39 GTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGG 98
||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||
Sbjct 1767228 GTGAACAGGGAAGAGCCCAGCGCCGAATCCCTGCCCCGCGGTGGGGCGCGGGCCATGTGG 1767169
Query 99 CGTA 102
||||
Sbjct 1767168 CGTA 1767165
>seq6822
Length=236664
Score = 102 bits (112), Expect = 4e-20
Identities = 85/103 (83%), Gaps = 1/103 (1%)
Strand=Plus/Plus
Query 1 GGAAAAGAAA-CTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGC 59
|||||| ||| |||||||||||||||||||||| || || ||||||||||||||||||
Sbjct 86889 GGAAAACAAAACTAACCAGGATTCCCTCAGTAATGGTGAATGAACAGGGAAGAGCCCAAT 86948
Query 60 GCCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102
|| ||| ||| | ||| |||||||| ||| ||| |||| ||
Sbjct 86949 GCTTAATTCCCACTCCGTGGTGGGGCATGGGCCATATGGCATA 86991
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 230322296160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |