Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= AAMG01001382.1 Length=124 Score E Sequences producing significant alignments: (Bits) Value seq6823 78.8 6e-13 seq15971 73.4 2e-11 >seq6823 Length=3687145 Score = 78.8 bits (86), Expect = 6e-13 Identities = 64/74 (86%), Gaps = 3/74 (4%) Strand=Plus/Plus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || ||||||||| |||||||| || |||||||||||||||||| Sbjct 2374273 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGTGGTGTGTACAAAGGGCAGGGATT 2374330 Query 109 TAATACAACGCAAG 122 |||| ||||||||| Sbjct 2374331 TAAT-CAACGCAAG 2374343 >seq15971 Length=175860 Score = 73.4 bits (80), Expect = 2e-11 Identities = 64/76 (84%), Gaps = 3/76 (4%) Strand=Plus/Minus Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108 |||||||| |||| || || |||||| | |||||| || ||||||||||| ||||||| Sbjct 17971 CTCACTAAACCATC-CAATCAGTAGTA-GTGACGGGTGGTGTGTACAAAGGACAGGGACT 17914 Query 109 TAATACAACGCAAGCT 124 |||| ||||||||||| Sbjct 17913 TAAT-CAACGCAAGCT 17899 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 300698553320