Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17]
35,974 sequences; 3,174,693,010 total letters
Query= AAMG01001382.1
Length=124
Score E
Sequences producing significant alignments: (Bits) Value
seq6823 78.8 6e-13
seq15971 73.4 2e-11
>seq6823
Length=3687145
Score = 78.8 bits (86), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 3/74 (4%)
Strand=Plus/Plus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || ||||||||| |||||||| || ||||||||||||||||||
Sbjct 2374273 CTCACTAAACCATC-CAATCGGTAGTA-GCGACGGGTGGTGTGTACAAAGGGCAGGGATT 2374330
Query 109 TAATACAACGCAAG 122
|||| |||||||||
Sbjct 2374331 TAAT-CAACGCAAG 2374343
>seq15971
Length=175860
Score = 73.4 bits (80), Expect = 2e-11
Identities = 64/76 (84%), Gaps = 3/76 (4%)
Strand=Plus/Minus
Query 49 CTCACTAAGCCATTTCATTCGGTAGTAAGCGACGGGCGGGGTGTACAAAGGGCAGGGACG 108
|||||||| |||| || || |||||| | |||||| || ||||||||||| |||||||
Sbjct 17971 CTCACTAAACCATC-CAATCAGTAGTA-GTGACGGGTGGTGTGTACAAAGGACAGGGACT 17914
Query 109 TAATACAACGCAAGCT 124
|||| |||||||||||
Sbjct 17913 TAAT-CAACGCAAGCT 17899
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 300698553320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |