Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17] 35,974 sequences; 3,174,693,010 total letters Query= AAMG01001884.1 Length=191 Score E Sequences producing significant alignments: (Bits) Value seq30334 73.4 4e-11 >seq30334 Length=1513675 Score = 73.4 bits (80), Expect = 4e-11 Identities = 102/140 (73%), Gaps = 5/140 (4%) Strand=Plus/Minus Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69 ||||||||||||||||||||| ||||||||||| || |||| | ||| | | Sbjct 1238479 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGTCCCGAGTTGCCTGGTTACCCCAGCTA 1238420 Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129 |||||||| ||| ||||| | ||||||||||| ||||| || || | | |||| Sbjct 1238419 GGAATAATGGAAAAGGAC-CACAATTCTATTTTGTTGGTTTTCAGAACTG-GGGCCATGA 1238362 Query 130 TAAATACGGATAGTCGGGGG 149 | || | |||| | |||||| Sbjct 1238361 TTAAGAGGGATGGCCGGGGG 1238342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 511821568960