Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Sarcophilus_20harrisii_20[refseq_20GCF_5F000189315.1_202011-02-17]
35,974 sequences; 3,174,693,010 total letters
Query= AAMG01002236.1
Length=287
Score E
Sequences producing significant alignments: (Bits) Value
seq8485 84.2 4e-14
seq897 75.2 2e-11
>seq8485
Length=70023
Score = 84.2 bits (92), Expect = 4e-14
Identities = 69/84 (82%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||||||||||||||| ||||||||
Sbjct 54033 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 53974
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||||||
Sbjct 53973 CTGAACGCCTCTAAGTCAGAATCC 53950
Score = 80.6 bits (88), Expect = 4e-13
Identities = 68/84 (81%), Gaps = 0/84 (0%)
Strand=Plus/Minus
Query 31 TTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTATGG 90
||||| | || | || |||| || || || |||||||||||||||| ||||||||
Sbjct 55925 TTGGTGTATGTGCTTGGCTGAGGAGCCAATGGGGCGAAGCTACCATCTGTGGGATTATGA 55866
Query 91 CTGAACGCCTCTAAGTCAGAATCC 114
||||||||||||||||||||| ||
Sbjct 55865 CTGAACGCCTCTAAGTCAGAAGCC 55842
>seq897
Length=60952
Score = 75.2 bits (82), Expect = 2e-11
Identities = 84/110 (76%), Gaps = 2/110 (2%)
Strand=Plus/Minus
Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60
|||||||||||||| | | |||||| | ||||| | || | || |||| || || |
Sbjct 17236 GTACGAGAGGAACCACAGG-TTCAGAC-ATTTGGTGTATGTGCTTGGCTGAGGAGCCAAT 17179
Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGA 110
| | |||| || |||||| |||||||| ||||| ||||||||||||||
Sbjct 17178 GGGGTGAAGATATCATCTGTGGGATTATGACTGAATGCCTCTAAGTCAGA 17129
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 818914510336
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |