Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Ornithorhynchus_20anatinus_20[refseq_20GCF_5F000002275.2_202011-06-
17] 200,154 sequences; 1,995,607,322 total letters
Query= NC_027867.1
Length=651523
Score E
Sequences producing significant alignments: (Bits) Value
seq197203 98.7 4e-15
seq160084 91.5 6e-13
seq152550 86.0 3e-11
seq152520 86.0 3e-11
>seq197203
Length=4209
Score = 98.7 bits (108), Expect = 4e-15
Identities = 104/136 (76%), Gaps = 1/136 (1%)
Strand=Plus/Minus
Query 349085 TCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAG 349144
|||||||| | ||||| ||||||||| ||||||||||||| |||||||| |||||||
Sbjct 3552 TCCTTGAGGCGGGGCACGCCCAGGGTGACGTTCTTGGCCGACACGCCGGCGTAGTGGAAC 3493
Query 349145 GTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACC 349204
|| | || |||| ||| ||| ||||| || | ||||| | || ||| ||| |||
Sbjct 3492 GTATTCAGCGTCATCTGGGTGGCCGGCTCCCCCAGCGACTGGGCGGCCAGGGCGCCCACC 3433
Query 349205 ATCT-CGCCGGGCGCG 349219
|||| | ||||| |||
Sbjct 3432 ATCTCCCCCGGGTGCG 3417
>seq160084
Length=22186
Score = 91.5 bits (100), Expect = 6e-13
Identities = 73/88 (83%), Gaps = 0/88 (0%)
Strand=Plus/Minus
Query 351185 ACGCGGTGCACCATGATGGACCCGTTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATG 351244
||||| ||| |||| |||||| ||||| ||||| ||||| || ||| ||||| ||||
Sbjct 16439 ACGCGATGCCCCATCATGGACATCTTGTGCAGCGTCGGCTGCCGGTTGAAGATGACGATG 16380
Query 351245 TCGCCATCGCGCAAGTGCCTCTCCACCT 351272
|||||||||| || ||||||||||||||
Sbjct 16379 TCGCCATCGCACATGTGCCTCTCCACCT 16352
>seq152550
Length=9544914
Score = 86.0 bits (94), Expect = 3e-11
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 349094 CTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAAGGTCTGGAGG 349153
||||| || |||| ||| |||||| | | | |||||| ||||||||||| | ||||
Sbjct 2805863 CTGGGGATCCCCAAGGTGACGTTCATCTCTCCTCTGCCGGCGAAGTGGAAGGTGTTGAGG 2805922
Query 349154 GTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTACCATCTCGCCG 349213
|||| ||| ||| ||| || ||||||| |||||| || || | ||| ||| ||| |||
Sbjct 2805923 GTCATCTGGGTGGAGGGTTCCCCGATGCTCTGGCCGGCTAGCAGGCCCACCGCCTCTCCG 2805982
Query 349214 GG 349215
||
Sbjct 2805983 GG 2805984
>seq152520
Length=20599146
Score = 86.0 bits (94), Expect = 3e-11
Identities = 126/174 (72%), Gaps = 6/174 (3%)
Strand=Plus/Minus
Query 448987 CTCGAGCAACATGGCGTAGGTCATGCGCGACGGGTAGGCATGCGGGTTCATGATGATGTC 449046
||||| || ||| || |||||| ||||||||| || | || ||||| | || ||||||
Sbjct 17673687 CTCGATCAGCATCCCGATGGTCATTCGCGACGGGAAGCCGTGAGGGTTGAAGAGGATGTC 17673628
Query 449047 GGGCGTCTCGCCGGCCGCGTTGAAGGGCATGTCCTCGGGGTTGACCAC--CAGGCCGTTG 449104
||| || ||| | | |||| ||||||||||| | | |||| | ||| |
Sbjct 17673627 CGGCATCATCCCGCTCTCCGTGAACGGCATGTCCTC--CGCCGGCCACAGCCGGCTCAGG 17673570
Query 449105 ACGCCCTTCTGGCCGTGGCGGCTGCAGAACTTGTC-CCCCTGCTCGGGCTTGCG 449157
| ||| |||||||||||||||||| |||||||| || || ||||| |||||
Sbjct 17673569 ATGCCTTTCTGGCCGTGGCGGCTGGCAAACTTGTCTCCGATGGTCGGG-TTGCG 17673517
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079262545820892
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |