Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30]
269,084 sequences; 3,286,013,499 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq264123 149 3e-33
seq188047 149 3e-33
seq74702 149 3e-33
seq158566 145 3e-32
seq90511 145 3e-32
seq200127 122 4e-25
seq82396 122 4e-25
seq24343 122 4e-25
seq167507 120 1e-24
seq266712 118 4e-24
seq41494 104 1e-19
seq256162 100 1e-18
seq261380 96.9 1e-17
seq267157 91.5 6e-16
seq251336 86.0 3e-14
seq159276 86.0 3e-14
seq264174 84.2 9e-14
seq261818 75.2 5e-11
seq94189 75.2 5e-11
>seq264123
Length=893400
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Minus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 108635 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 108576
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 108575 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 108516
>seq188047
Length=629
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 243 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 302
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 303 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 362
>seq74702
Length=729
Score = 149 bits (164), Expect = 3e-33
Identities = 105/120 (88%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 152 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 211
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 212 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 271
>seq158566
Length=607
Score = 145 bits (160), Expect = 3e-32
Identities = 104/120 (87%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| |||| |||||||||||||||||||
Sbjct 65 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAGGAAACTCTG 124
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || | |||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 125 GTGGAGGTCCGTACCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 184
>seq90511
Length=358
Score = 145 bits (160), Expect = 3e-32
Identities = 104/120 (87%), Gaps = 0/120 (0%)
Strand=Plus/Plus
Query 564 TGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTG 623
|||| |||||||||||||||||||||||||||| ||| |||||||||||||||||||
Sbjct 170 TGTTAGGACCCGAAAGATGGTGAACTATGCCTGGGCTGGGCGAAGCCAGAGGAAACTCTG 229
Query 624 GTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
||||||| || |||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 230 GTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 289
>seq200127
Length=419
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 178 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 119
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 118 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 59
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 58 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 19
>seq82396
Length=413
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 161 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 102
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 101 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 42
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 41 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 2
>seq24343
Length=461
Score = 122 bits (134), Expect = 4e-25
Identities = 123/160 (77%), Gaps = 0/160 (0%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| |||||| | | ||||| |||||||
Sbjct 322 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 263
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 262 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 203
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 202 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 163
>seq167507
Length=645
Score = 120 bits (132), Expect = 1e-24
Identities = 92/108 (85%), Gaps = 1/108 (1%)
Strand=Plus/Minus
Query 576 AAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGAGGCTCGC 635
||||||||||||||||||||| |||| ||||||||| ||| |||||||||||| ||
Sbjct 645 AAAGATGGTGAACTATGCCTGGGCAGGGCGAAGCCAGAAGAA-CTCTGGTGGAGGTCCGT 587
Query 636 AGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGGCGA 683
|||||| ||| ||||||||||| ||||| | |||||||||||||||
Sbjct 586 AGCGGTCCTGACGTGCAAATCGGTCGTCCGACCTGGGTATAGGGGCGA 539
>seq266712
Length=380
Score = 118 bits (130), Expect = 4e-24
Identities = 122/160 (76%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||| ||||| | || ||| |||||| | | ||||| |||||||
Sbjct 29 GAGTCGGGTTGCTTGGGAAGGCAGCCCAAAGCGGGTGGTAAACTCCATCTAAGGCTAAAT 88
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || | ||||| ||||||| |||||| |
Sbjct 89 ACCGGCACGAGACCGATAGTCAACAAGTACCGTAAGGGAAAGTTGAAAAGAACTTTGAAG 148
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 149 AGAGAGTTCAAGAGGGCGTGAAACCGTTAAGAGGTAAACG 188
>seq41494
Length=377
Score = 104 bits (114), Expect = 1e-19
Identities = 119/160 (74%), Gaps = 0/160 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | | ||| |||| | | | ||||| |||||||
Sbjct 155 GAGTCGGGTTGCTTGGGAATGCAGCCCAGAGCGGGTGGTACACTCCATCTAAGGCTAAAT 214
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| ||||||||||| ||||||| || ||||| ||| ||| |||||| |
Sbjct 215 ACCGGCACGAGACCGATAGTCAACAAGTACCGTATGGGAAAGTTGATAAGAACTTTGAAG 274
Query 160 AGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||||||| || || ||||||| ||| | ||| || ||
Sbjct 275 AGAGAGTTCAAGAGGGCGTGAAAACGTTAAGAGGTAAACG 314
>seq256162
Length=404384
Score = 100 bits (110), Expect = 1e-18
Identities = 94/119 (79%), Gaps = 2/119 (2%)
Strand=Plus/Minus
Query 564 TGTTG--GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTC 621
||||| ||||| || ||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 319548 TGTTGTAGGACCTGACAGATGGTGAGCTATGCCTGGGCAGGGTGAAGCCAGAGGAAACTC 319489
Query 622 TGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
||||||||| | || ||| ||| || ||||| | ||| | | ||| ||||||||
Sbjct 319488 TGGTGGAGGTCCATAGTGGTCCTGATGTACAAATTGGTCGAAAGACCTGGCTATAGGGG 319430
>seq261380
Length=897698
Score = 96.9 bits (106), Expect = 1e-17
Identities = 98/128 (77%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | |||| ||||||||||||| | || || | |||||| ||| ||||| ||||| |
Sbjct 485628 GAGTTGGGTTGCTTGGGAATGCAGCCCAAAGTGTGTGGTAAACTTCCTCTAAGGCTAACT 485687
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| || | |||||||||||| ||||||| | | ||||| ||||||| ||||||
Sbjct 485688 ACTGCCAAGAGACCGATAGTCAACAAGTACCATAAGGGAAAGTTGAAAAGAACTTTGAGG 485747
Query 160 AGAGAGTT 167
||||| ||
Sbjct 485748 AGAGAATT 485755
>seq267157
Length=339
Score = 91.5 bits (100), Expect = 6e-16
Identities = 97/128 (76%), Gaps = 0/128 (0%)
Strand=Plus/Plus
Query 72 GGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAG 131
||| |||||| | | ||||| |||||||| ||| ||||||||||| ||||||| |
Sbjct 2 GGGTGGTAAACTCCATCTAAGGCTAAATACCGGCACGAGACCGATAGTCAACAAGTACCG 61
Query 132 TGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAA 191
| | ||||| ||||||| |||||| | |||||||| || || ||||||| ||| | |
Sbjct 62 TAAGGGAAAGTTGAAAAGAACTTTGAAGAGAGAGTTCAAGAGGGCGTGAAACCGTTAAGA 121
Query 192 GGGAAGCG 199
|| || ||
Sbjct 122 GGTAAACG 129
>seq251336
Length=114171
Score = 86.0 bits (94), Expect = 3e-14
Identities = 92/122 (75%), Gaps = 0/122 (0%)
Strand=Plus/Plus
Query 556 AGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGG 615
|||| | |||| ||||| | ||||||||||||| ||| || |||| |||||||||||
Sbjct 82118 AGCACACGTGTTAGGACCTGCAAGATGGTGAACTCTGCATGGGCAGGGCGAAGCCAGAGG 82177
Query 616 AAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTAT 675
|||| ||||||||| | ||| ||||||| || || || || ||| | ||||| |
Sbjct 82178 AAACCGTGGTGGAGGTCCACAGTGGTTCTGAGATGAAAGTCAGTCATCAGACGTGGGTGT 82237
Query 676 AG 677
||
Sbjct 82238 AG 82239
>seq159276
Length=550
Score = 86.0 bits (94), Expect = 3e-14
Identities = 64/75 (85%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 609 CCAGAGGAAACTCTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATT 668
||| |||||||||||||||||| || |||||| ||| ||||||||||| ||||| |
Sbjct 1 CCACAGGAAACTCTGGTGGAGGTCCGTAGCGGTCCTGACGTGCAAATCGGTCGTCCGACC 60
Query 669 TGGGTATAGGGGCGA 683
|||||||||||||||
Sbjct 61 TGGGTATAGGGGCGA 75
>seq264174
Length=252593
Score = 84.2 bits (92), Expect = 9e-14
Identities = 104/143 (73%), Gaps = 6/143 (4%)
Strand=Plus/Minus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||| | | || ||||||||||||| | || ||| |||||||| | ||||| |||||||
Sbjct 49460 GAGTTGGGCTGCTTGGGAATGCAGCCCAAAGCGGGTGGTAAATTCCATCTAAGGCTAAAT 49401
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAA 159
| ||| |||| ||||| ||||| | || ||| ||||||| |||||| |
Sbjct 49400 ACCGGCACAAGACTGATAGTCAACAAGCACGGT------AAGTTGAAAAGAACTTTGAAC 49347
Query 160 AGAGAGTTAAAAAGCACGTGAAA 182
|||||||| || || | |||||
Sbjct 49346 AGAGAGTTCAAGAGGGCATGAAA 49324
>seq261818
Length=964067
Score = 75.2 bits (82), Expect = 5e-11
Identities = 85/114 (75%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| |||| | || |||||||||||||| ||| || | ||||||||||||||| ||||
Sbjct 493370 TTAGGACACAAAGGATGGTGAACTATGGCTGGGCAGAGCAAAGCCAGAGGAAACTTTGGT 493429
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||| | ||| || ||| | |||||| | || || | ||||| |||||
Sbjct 493430 GGAGGTCCATAGCAGTCCTGACATGCAAAGCTATTGTTTGACCTGGGTCTAGGG 493483
>seq94189
Length=2047
Score = 75.2 bits (82), Expect = 5e-11
Identities = 85/114 (75%), Gaps = 0/114 (0%)
Strand=Plus/Minus
Query 566 TTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGT 625
|| |||| | || |||||||||||||| ||| || | ||||||||||||||| ||||
Sbjct 653 TTAGGACACAAAGGATGGTGAACTATGGCTGGGCAGAGCAAAGCCAGAGGAAACTTTGGT 594
Query 626 GGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGG 679
||||| | ||| || ||| | |||||| | || || | ||||| |||||
Sbjct 593 GGAGGTCCATAGCAGTCCTGACATGCAAAGCTATTGTTTGACCTGGGTCTAGGG 540
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2074228148200
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