Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30] 269,084 sequences; 3,286,013,499 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq212978 179 2e-43 seq200127 170 9e-41 seq82396 170 9e-41 seq242399 127 9e-28 seq262482 82.4 4e-14 >seq212978 Length=318 Score = 179 bits (198), Expect = 2e-43 Identities = 101/102 (99%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 108 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 49 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 48 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 7 >seq200127 Length=419 Score = 170 bits (188), Expect = 9e-41 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 399 GGAAAAGAAACTACCCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 340 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| ||| |||||| Sbjct 339 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGAGGCGTA 298 >seq82396 Length=413 Score = 170 bits (188), Expect = 9e-41 Identities = 99/102 (97%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 382 GGAAAAGAAACTATCCAGGATTCCCTCAGTAACGGTGAGTGAACAGGGAAGAGCCCAGCG 323 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 ||||||||||||||||||||||||||||||| |||||||||| Sbjct 322 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGAAATGTGGCGTA 281 >seq242399 Length=11191 Score = 127 bits (140), Expect = 9e-28 Identities = 89/102 (87%), Gaps = 7/102 (7%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 |||| ||||||||||||||||||||||||||| || |||||||||||||||| | Sbjct 9362 GGAAGAGAAACTAACCAGGATTCCCTCAGTAATGGTGAGTGAACAGGGAAGA-------G 9310 Query 61 CCGAATCCCCGCCCCGCGGTGGGGCGCGGGACATGTGGCGTA 102 | |||||||||||||||||||||| |||||| |||||||||| Sbjct 9309 CTGAATCCCCGCCCCGCGGTGGGGTGCGGGAAATGTGGCGTA 9268 >seq262482 Length=41206 Score = 82.4 bits (90), Expect = 4e-14 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Minus Query 26 TCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCGCCGAATCCCCGCCCCGCGGTGGGGC 85 ||| || ||| ||||||||||||||||||||||||| |||||| | || |||||||||| Sbjct 9842 TCACTACTGGCTAGTGAACAGGGAAGAGCCCAGCGCC-AATCCCTG-CCTGCGGTGGGGC 9785 Query 86 GCGGGACATGTGGCGTA 102 ||| || ||||||| || Sbjct 9784 GCGTGATATGTGGCCTA 9768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 229818778560