Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Choloepus_20hoffmanni_20[genbank_20GCA_5F000164785.2_202014-09-30]
269,084 sequences; 3,286,013,499 total letters
Query= AAMG01001884.1
Length=191
Score E
Sequences producing significant alignments: (Bits) Value
seq268321 96.9 4e-18
seq181894 96.9 4e-18
seq73707 96.9 4e-18
seq40783 96.9 4e-18
seq265343 93.3 4e-17
seq230529 93.3 4e-17
seq14845 93.3 4e-17
seq156842 91.5 2e-16
seq51767 87.8 2e-15
seq268411 80.6 3e-13
seq169369 75.2 1e-11
>seq268321
Length=612
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 541 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 482
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 481 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 424
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 423 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 368
>seq181894
Length=686
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 617 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 558
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 557 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 500
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 499 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 444
>seq73707
Length=462
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 108 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 167
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 168 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 225
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 226 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 281
>seq40783
Length=830
Score = 96.9 bits (106), Expect = 4e-18
Identities = 129/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 763 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 704
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 703 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 646
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 645 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 590
>seq265343
Length=400
Score = 93.3 bits (102), Expect = 4e-17
Identities = 128/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Plus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| || ||||||||||| || | |||| | |
Sbjct 20 TTTACTTTGAAAAAATTAGAGTGTACAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 79
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 80 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 137
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 138 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 193
>seq230529
Length=628
Score = 93.3 bits (102), Expect = 4e-17
Identities = 128/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 559 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 500
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | ||||
Sbjct 499 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGA 442
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|| | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 441 ATAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 386
>seq14845
Length=928
Score = 93.3 bits (102), Expect = 4e-17
Identities = 128/176 (73%), Gaps = 5/176 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 857 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTA 798
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGA 129
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | ||||
Sbjct 797 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAAATGAGGCCATGA 740
Query 130 TAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 739 TTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 684
>seq156842
Length=729
Score = 91.5 bits (100), Expect = 2e-16
Identities = 129/177 (73%), Gaps = 6/177 (3%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAA-TTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCA 68
||||||||||||||| |||||| |||||||||||||| || | |||| | |
Sbjct 673 TTTACTTTGAAAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCT 614
Query 69 TGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATG 128
|||||||| ||||||||| ||||||||||||||| ||||| | ||| | | |||
Sbjct 613 AGGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATG 556
Query 129 ATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|| || | ||| | |||||| | ||||| | | ||||||||||||||||
Sbjct 555 ATTAAGAGGGACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 499
>seq51767
Length=61860
Score = 87.8 bits (96), Expect = 2e-15
Identities = 81/101 (80%), Gaps = 4/101 (4%)
Strand=Plus/Minus
Query 13 TTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCAT 69
||||||||||||||||||||| |||||||||||||| || | |||| | |
Sbjct 50262 TTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCCGGGCCGCCTGGATACCGCAGCTA 50203
Query 70 GGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTT 110
|||||||| ||||||||| ||||||||||||||| |||||
Sbjct 50202 GGAATAATGGAATAGGAC-CGCGGTTCTATTTTGTTGGTTT 50163
>seq268411
Length=648
Score = 80.6 bits (88), Expect = 3e-13
Identities = 128/181 (71%), Gaps = 2/181 (1%)
Strand=Plus/Minus
Query 5 CCAGGACTTTTACTTTGAAAAAATTAGAGCGTTCAAAGCAGGCCTTTGCTCGAATACATT 64
|||| | ||||| ||||||| ||||||| | |||| || ||| ||| ||||||
Sbjct 642 CCAGCAAGTTTACCTTGAAAATATTAGAGTGCTCAATGCGGGCTAATGCATGAATACTCG 583
Query 65 ACCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGT 124
||||||||||| ||||||| | |||||||||||||| ||||| | || | |
Sbjct 582 TGCATGGAATAATGAAATAGGATCT-CGGTTCTATTTTGTTGGTTT-TCTGATCTGAGAT 525
Query 125 AATGATAAATACGGATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGG 184
|||| | || | ||| | |||||| | |||| || | |||||||||||||||
Sbjct 524 AATGGTTAAGAGGGACGGACGGGGGCATTCGTATCGCTGCGTGAGAGGTGAAATTCTTGG 465
Query 185 A 185
|
Sbjct 464 A 464
>seq169369
Length=653
Score = 75.2 bits (82), Expect = 1e-11
Identities = 120/168 (71%), Gaps = 6/168 (4%)
Strand=Plus/Minus
Query 22 AAAAAATTAGAGCGTTCAAAGCAGGCC---TTTGCTCGAATACATTACCATGGAATAATA 78
|||||||||||| |||||||||||||| || | |||| | | ||||||||
Sbjct 649 AAAAAATTAGAGTGTTCAAAGCAGGCCCGAGCCGCCTGGATACCGCAGCTAGGAATAATG 590
Query 79 GAATAGGACGTGCGGTTCTATTTTGTAGGTTTCTAGGACCGCCCGTAATGATAAATA-CG 137
||||||||| ||||||||||||||| ||||| | ||| | | ||||| || | |
Sbjct 589 GAATAGGAC-CGCGGTTCTATTTTGTTGGTTT-TCGGAACTGAGGCCATGATTAAGAGGG 532
Query 138 GATAGTCGGGGGTGTCAGTATTCAATTGTCAAAGGTGAAATTCTTGGA 185
|| | |||||| | ||||| | | ||||||||||||||||
Sbjct 531 GACGGCCGGGGGCATTCGTATTGCGCCGCTAGAGGTGAAATTCTTGGA 484
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 510665343360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |