Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Acanthisitta_20chloris_20[refseq_20GCF_5F000695815.1_202014-05-27]
53,875 sequences; 1,035,876,403 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq37162 246 5e-63
>seq37162
Length=1140
Score = 246 bits (272), Expect = 5e-63
Identities = 206/248 (83%), Gaps = 6/248 (2%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||||||||||||||||| | ||||||||||||||||||||||||||||||| |
Sbjct 673 GTCAGTGTAGCGCGCGTGCGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC-T 615
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133
||| || | |||||| | |||| | |||||||||||||| | | || ||| | |
Sbjct 614 CAATCT-CGGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGG 556
Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
| | | | ||| |||||| | | ||||||||||||||||||||||||||||||||
Sbjct 555 GGGTCGCGTAACTAGTTAGCATGCCAGAGTCTCGTTCGTTATCGGAATTAACCAGACAAA 496
Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250
|| ||||||||||||||||||||||||||||||||||||| ||| |||||||| | ||
Sbjct 495 TCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATGAAATTGAGAAAGAGTTCTC 436
Query 251 AATCTGTC 258
||||||||
Sbjct 435 AATCTGTC 428
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796384138875
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |