Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq2882 78.8 4e-12 seq2763 77.0 1e-11 seq2737 77.0 1e-11 seq2670 77.0 1e-11 >seq2882 Length=529265 Score = 78.8 bits (86), Expect = 4e-12 Identities = 96/131 (73%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 52 TTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGA 111 ||||||||||||| | ||||| | |||||| | | | | ||| | || | || ||| Sbjct 138622 TTGGGAATGCAGCCCAAAATGTGTGGTAAACTATATTTCAGGCTCATTACTAGCACAAGA 138681 Query 112 CCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTTGGAAAGAGAGTTAAAA 171 | |||||| ||||||| ||| | ||||| |||||| |||||| | |||||||| || Sbjct 138682 CTGATAGCTAACAAGTACAGTAAGAGAAAGTTGAAAATAACTTTGAAGAGAGAGTTCAAG 138741 Query 172 AGCACGTGAAA 182 || |||||| Sbjct 138742 AGGGTGTGAAA 138752 >seq2763 Length=661448 Score = 77.0 bits (84), Expect = 1e-11 Identities = 66/82 (80%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | |||||| || | |||||| |||| ||| |||| ||||||| |||| |||| Sbjct 275565 GAGCATGAGCATCCATGCTAGGACCCAAAAGGTGGCGAACCATGCCTGGGCAGGGCGAAG 275506 Query 609 CCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||| |||||| Sbjct 275505 CCAGAGGAAACTCTGATGGAGG 275484 >seq2737 Length=690536 Score = 77.0 bits (84), Expect = 1e-11 Identities = 75/97 (77%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 59 TGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAATATTGGCCAGAGACCGATAG 118 |||||| | || |||| |||||| | | ||||| |||||||| || ||||||||||| Sbjct 176730 TGCAGCCCAAAGTGGGTGGTAAACTCCATCTAAGGCTAAATACCAGCATGAGACCGATAG 176671 Query 119 CGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTTT 155 | ||||||| || | ||||| ||||||| ||||| Sbjct 176670 CCAACAAGTACTGTAAGGGAAAGTTGAAAAGAACTTT 176634 >seq2670 Length=753094 Score = 77.0 bits (84), Expect = 1e-11 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||| |||||||||||||||||| || |||| || |||||||||||||||||||| Sbjct 482983 GGACCCCAAAGATGGTGAACTATGCATGGGCAGGGCAAATCCAGAGGAAACTCTGGTGGA 483042 Query 629 GG 630 || Sbjct 483043 GG 483044 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2079930673600