Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq703 340 3e-91 seq2567 304 2e-80 seq925 251 1e-64 seq492 237 3e-60 seq106 178 2e-42 seq3000 165 1e-38 seq19 87.8 3e-15 seq1270 82.4 1e-13 >seq703 Length=1727845 Score = 340 bits (376), Expect = 3e-91 Identities = 233/263 (89%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 357859 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 357800 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 357799 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 357740 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 357739 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 357680 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | | |||||||| ||| Sbjct 357679 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGG 357620 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| ||| ||||||| Sbjct 357619 CCCCGCTTTCACGGTCTGTATTC 357597 >seq2567 Length=4963078 Score = 304 bits (336), Expect = 2e-80 Identities = 209/235 (89%), Gaps = 1/235 (0%) Strand=Plus/Plus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 3578116 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 3578175 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | |||||||||| ||||||||||||||||||||||||||||| ||||||||||||| | Sbjct 3578176 ANGACGGTCTAATCCCAGCTCACGTTCCCTATTAGTGGGTGAGCAATCCAACGCTTGGTG 3578235 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 3578236 AATTCTGCTTCACAATGATAGTAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 3578295 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 ||||||| |||| |||||| ||||||||||||||||||||||||||| |||||| Sbjct 3578296 TGAACGCCTGGCCACCACAAACCAGTTATCCCTGTGGTAACTTTTCTGACACCTC 3578350 >seq925 Length=1578202 Score = 251 bits (278), Expect = 1e-64 Identities = 199/236 (84%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 438700 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 438641 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||| |||||||||||||| ||||||||| |||||||||||||| ||| | | Sbjct 438640 AAGACGGTCTATACCCAGCTCACGTTTCCTATTAGTTGGTGAACAATCCAATACTTGCTG 438581 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG-AAGGATCAAAAAGCAACGTCGCT 178 ||||||||||| |||||||||||| |||| ||||||||||||| || || || Sbjct 438580 AATTCTGCTTCACAATGATAGGAAGA----NGATCGAAAGGATCAAAAAGAGACATCACT 438525 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||| |||||| |||||||||||||||||||||||||||||||||| |||||| Sbjct 438524 ATGAACACTTGGCCTCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACCTC 438469 >seq492 Length=1790298 Score = 237 bits (262), Expect = 3e-60 Identities = 194/235 (83%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACG-GTCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| || | ||||| |||| | || ||||||||||||||||||| |||||||||| Sbjct 1503463 TACTGAGGAGCATTACTATTGCAACAACACGTCATCAGTAGGGTAAAACAAACCTGTCTC 1503404 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 ||||| |||||| ||||||||| ||||||||| ||||||||||||||||||| ||| | Sbjct 1503403 ATGACAGTCTAATCCCAGCTCATGTTCCCTATAAGTGGGTGAACAATCCAACACTTGGTG 1503344 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAACGTCGCTA 179 |||||||| || |||||||||||| | ||||| ||||||| |||||| | ||||||| Sbjct 1503343 AATTCTGCGTCACAATGATAGGAAGATCTGACATTGAAGGATTAAAAAGTGATGTCGCTA 1503284 Query 180 TGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||| |||||| | ||||||| |||||||||| ||||||||| ||| ||| || Sbjct 1503283 TGAATTCTTGGCNGTCACAAGCTGGTTATCCCTGCGGTAACTTTCCTGTCACTTC 1503229 >seq106 Length=198342 Score = 178 bits (196), Expect = 2e-42 Identities = 158/198 (80%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||||||||| |||| |||| | |||||||||||| ||||||||||||||||||||||| Sbjct 79855 GGTGAACAACCCAAAGCTTGCTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGA 79914 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 |||||||| ||| || || |||||||| ||| ||||||||||||||||||||||||| | Sbjct 79915 AGGATCAAGAAGTGACATCTCTATGAACACTTAGCTGCCACAAGCCAGTTATCCCTGTTG 79974 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 | ||| || || |||| || | ||| | | | | |||||||| ||||| | | Sbjct 79975 TGACTCTTATGATGCCTCCTGCGTAAAACCCCAAAAGGCAGAAGGATCGTGAGGCCCCGC 80034 Query 277 TTTCATGGTTTGTATTCA 294 ||||| ||| |||||||| Sbjct 80035 TTTCAAGGTGTGTATTCA 80052 >seq3000 Length=2260895 Score = 165 bits (182), Expect = 1e-38 Identities = 144/179 (80%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| ||||||||||||| ||||| ||||| ||||||| ||||||||| ||||||| Sbjct 1206466 TCATAAGTAGGGTAAAAC----CTGTCACATGATGGTCTAATCCCAGCTCATGTTCCCTG 1206411 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| |||| |||| || | |||| |||||||||||| | || ||||||| || Sbjct 1206410 TTAGCAGGTGGACAACCCTATGCTTGGTGAATTCTGCTTCACAGTTATGGGAAGAGATGA 1206351 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATC 209 || |||||||||||||||||| | ||| ||||| |||| |||||||||||||||||| Sbjct 1206350 CACTGAAGGATCAAAAAGCAACATTGCTGTGAACANTTGGATGCCACAAGCCAGTTATC 1206292 >seq19 Length=246603 Score = 87.8 bits (96), Expect = 3e-15 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| | ||||||||| || | ||||||||||||||||||| || Sbjct 86237 TCATCAGTAGGGTAAAACCAGCCTGTCTCACAACAGCCTAAACCCAGCTCACGTTCTCTG 86296 Query 91 TTAGT-GGGTGAA 102 ||||| ||||||| Sbjct 86297 TTAGTGGGGTGAA 86309 >seq1270 Length=1457724 Score = 82.4 bits (90), Expect = 1e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| ||||||||||||||||||||||| | ||| |||||||||||| |||||| Sbjct 845587 TCATCAGTAAGGTAAAACTAACCTGTCTCATGATGATCT-AACCCAGCTCACATTCCCTT 845645 Query 91 TT 92 || Sbjct 845646 TT 845647 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854372385792