Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq2682 419 7e-115 >seq2682 Length=729318 Score = 419 bits (464), Expect = 7e-115 Identities = 406/515 (79%), Gaps = 16/515 (3%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACC-CAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCTCC 62 ||||||||||||||| | || | |||||| ||||||| ||||| | |||||||||||| Sbjct 578391 CTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTATTGTTATTTTTNGTCACTACCTCC 578332 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 ||| ||||||| |||||||||||| |||||||||||||||||||||||||||||| |||| Sbjct 578331 CCGGGTCGGGAGTGGGTAATTTGCACGCCTGCTGCCTTCCTTGGATGTGGTAGCCATTTC 578272 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 ||||||||||||||||||| ||||||| ||||||||| || ||| | ||||||||||| Sbjct 578271 TCAGGCTCCCTCTCCGGAANTGAACCCTGATTCCCCGTCACTCGTGGTCACCATGGTAGG 578212 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 | | ||||||||||||||||||||||||| ||| ||||| | |||||| | | Sbjct 578211 CACAGACAGTACCATCGAAAGTTGATAGGGCAGACATTCGAATGGGTCGTCGCCGCCGCN 578152 Query 243 AGGCCATGCGATTCGTT--AAGTTATTATGAATCACCAAGGAGCCCCGAAGGGC----GT 296 || | |||||| | | | ||||| || ||||||| | || | |||| | Sbjct 578151 GGGGCGTGCGATCGGCTCGAGGTTATCTAGAGTCACCAAAGCTGCCGGGCGGGCCCAGGC 578092 Query 297 TGGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGG-GGTTTTTAGCATGTATTA 353 ||| |||| ||| |||||| ||| | || || ||||| | | |||||||||| Sbjct 578091 TGG-TTTTGGTCTGATAAATGCACGTGTCCCCGGAGGTCGGCTCTCGTCGGCATGTATTA 578033 Query 354 GCTCTAGAATTACCACGGTTATCCATGTA----GTAAGGTACTATCAAATAAACGATAAC 409 |||||||||||||||| |||||||| | | | ||| | | |||| ||| ||||| Sbjct 578032 GCTCTAGAATTACCACAGTTATCCAAGGAGCCGGAGAGGAGCGACCAAAGGAACCATAAC 577973 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGG 469 ||||| |||||||||||||||||||||||||| | | | ||||||||||||||||| Sbjct 577972 TGATTCAATGAGCCATTCGCAGTTTCACTGTACCGCCCGTGTGTACTTAGACATGCATGG 577913 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||| |||||||||||||||||| |||||||||| Sbjct 577912 CTTAAGCTTTGAGACAAGCATATG-CTACTGGCAG 577879 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510351183872