Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20aestiva_20[genbank_20GCA_5F001420675.1_202015-10-30] 3,232 sequences; 1,129,535,839 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq155 111 1e-19 seq2913 95.1 1e-14 seq2787 91.5 1e-13 >seq155 Length=184411 Score = 111 bits (122), Expect = 1e-19 Identities = 124/162 (77%), Gaps = 4/162 (2%) Strand=Plus/Minus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| || ||||| || ||||| |||||||||| ||||| || Sbjct 7007 GGTATACTCCACGATTTCTGTACACAGGTTGCTGCATTTGATGGTGCCCAGGTTCTGCTG 6948 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 || ||||| | ||||| | || ||||| | |||||| || |||||||||||| || Sbjct 6947 GTTGCTCTTCCTGTTGCAGGAGTCTTTGTAGAGCATGTAGGGTGTGCCGGTCTCAGTCTG 6888 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGC-GC-GTGCCTTCACC 66208 ||||| ||||||| || || ||||| || | ||||||||| Sbjct 6887 TGACTCGATGATGGAGTACC--AGAGCTGCTGGGCCTTCACC 6848 >seq2913 Length=504153 Score = 95.1 bits (104), Expect = 1e-14 Identities = 91/117 (78%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 ||| |||||| ||||||||||| | | || || ||||||||||| ||||| |||| Sbjct 486453 TGGCACGTTTTAGTCAGGAGGTGCAGATCCCAGAAGCCCGTTGTTTCTATGGCTTTCAGA 486512 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 || ||| ||||| || ||||| ||||||||||| | ||||| || || ||||||| Sbjct 486513 TTCTCATTGAGAACGTTCACTCAGAGATGTACAGCTTGCTCATAGACACCTACATCA 486569 >seq2787 Length=631671 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/115 (77%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || |||||||| | || || || |||||||| |||||||||| Sbjct 599241 TGGAGCGGTTCAGTCAAGAAGTGCAAGTCACAGAAGCTCGCTGTTTCTATGGCTTCCAGA 599182 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACAT 61370 |||||||||| || | || || || ||||||||| |||| || || || ||||| Sbjct 599181 TTGCCATGGAAAACATACATTCAGAAATGTACAGTCTTCTTATTGACACCTACAT 599127 Score = 84.2 bits (92), Expect = 2e-11 Identities = 77/98 (79%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 || || || || || ||||| | ||||||||| |||| | || ||||||| ||||| Sbjct 600499 GACAACCCCCGCCGCTTCGTCATATTCCCCATCCAGTACCACGACATTTGGCAGATGTAN 600440 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || || ||||||||||||| ||||||||| Sbjct 600439 AAGAAGGCTGAGGCCTCCTTCTGGACGGCGGAGGAGGT 600402 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397552339796480