Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= AAMG01000304.1 Length=683 Score E Sequences producing significant alignments: (Bits) Value seq166877 86.0 3e-14 seq20246 77.0 1e-11 >seq166877 Length=3393 Score = 86.0 bits (94), Expect = 3e-14 Identities = 68/82 (83%), Gaps = 0/82 (0%) Strand=Plus/Minus Query 549 GAGTAAGAGCATAGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAG 608 ||| | |||||| |||| |||||| |||| ||| |||| ||||||| | |||| |||| Sbjct 587 GAGCATGAGCATCCATGTTAGGACCCAAAAGGTGGCGAACCATGCCTGGACAGGGCGAAG 528 Query 609 CCAGAGGAAACTCTGGTGGAGG 630 ||||||||||||||| |||||| Sbjct 527 CCAGAGGAAACTCTGATGGAGG 506 >seq20246 Length=5146 Score = 77.0 bits (84), Expect = 1e-11 Identities = 54/62 (87%), Gaps = 0/62 (0%) Strand=Plus/Plus Query 569 GGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACTCTGGTGGA 628 |||||| |||||||||||||||||| || |||| || |||||||||||||||||||| Sbjct 2943 GGACCCCAAAGATGGTGAACTATGCATGGGCAGGGCAAATCCAGAGGAAACTCTGGTGGA 3002 Query 629 GG 630 || Sbjct 3003 GG 3004 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2076075207700