Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq72142 246 5e-63 seq73630 228 1e-57 seq68267 178 2e-42 seq55074 168 1e-39 seq150563 141 2e-31 seq95945 118 2e-24 seq106394 91.5 3e-16 seq7982 87.8 3e-15 seq65606 82.4 1e-13 >seq72142 Length=18322 Score = 246 bits (272), Expect = 5e-63 Identities = 198/236 (84%), Gaps = 6/236 (3%) Strand=Plus/Minus Query 1 TACTAAGCGGAATTACCATTGGGGCGACGG-TCATCAGTAGGGTAAAACTAACCTGTCTC 59 |||| ||| | ||||| |||| | || ||||||||||||||||||||||||||||| Sbjct 18123 TACTGAGCAGGATTACTATTGCAACAACACATCATCAGTAGGGTAAAACTAACCTGTCTC 18064 Query 60 ATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACGCTTACCG 119 | ||||||||| |||||||||||||| ||||||||| |||||||||||||| ||| | | Sbjct 18063 ACGACGGTCTATACCCAGCTCACGTTTCCTATTAGTTGGTGAACAATCCAATACTTGCTG 18004 Query 120 AATTCTGCTTCGGTATGATAGGAAGAGCCGACATCG-AAGGATCAAAAAGCAACGTCGCT 178 |||| |||||| ||||||||||||| |||| ||||||| ||||| || ||||| Sbjct 18003 AATTTTGCTTCACAATGATAGGAAGAG----GATCGAAAGGATCTAAAAGAGACATCGCT 17948 Query 179 ATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACCTC 234 |||||| |||||| ||||||||||||||||||||| |||||||||||| |||||| Sbjct 17947 ATGAACACTTGGCCTCCACAAGCCAGTTATCCCTGTAGTAACTTTTCTGACACCTC 17892 >seq73630 Length=10432 Score = 228 bits (252), Expect = 1e-57 Identities = 173/204 (85%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| ||||||||||||||| |||||| ||||||||| |||||||| Sbjct 10056 TCATCAGTAGGGTAAAACAAACCTGTCTCATGACAGTCTAATCCCAGCTCATGTTCCCTA 9997 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 | ||||||||||||||||||| ||| ||||||||| || |||||||||||| | || Sbjct 9996 TAAGTGGGTGAACAATCCAACACTTGGTGAATTCTGCGTCACAATGATAGGAAGATCTGA 9937 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||| ||||||| |||||| | || |||||||| |||| | | ||||||| ||||||| Sbjct 9936 CATTGAAGGATTAAAAAGTGATGTTGCTATGAATTCTTGACCGTCACAAGCTGGTTATCC 9877 Query 211 CTGTGGTAACTTTTCTGGCACCTC 234 ||||||||||||| ||| ||| || Sbjct 9876 CTGTGGTAACTTTCCTGTCACTTC 9853 >seq68267 Length=65221 Score = 178 bits (196), Expect = 2e-42 Identities = 158/198 (80%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 97 GGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGA 156 ||||||||| |||| |||| | |||||||||||| ||||||||||||||||||||||| Sbjct 48524 GGTGAACAACCCAAAGCTTGCTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGA 48465 Query 157 AGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 |||||||| ||| || || |||||||| ||| ||||||||||||||||||||||||| | Sbjct 48464 AGGATCAAGAAGTGACATCTCTATGAACACTTAGCTGCCACAAGCCAGTTATCCCTGTTG 48405 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 | ||| || || |||| || | ||| | | | | |||||||| ||||| | | Sbjct 48404 TGACTCTTATGATGCCTCCTGCGTAAAACCCCAAAAGGCAGAAGGATCGTGAGGCCCCGC 48345 Query 277 TTTCATGGTTTGTATTCA 294 ||||| ||| |||||||| Sbjct 48344 TTTCAAGGTGTGTATTCA 48327 >seq55074 Length=19855 Score = 168 bits (186), Expect = 1e-39 Identities = 196/264 (74%), Gaps = 9/264 (3%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||| ||||||||||||| ||||| ||||| ||||||| ||| ||||| ||||||| Sbjct 4791 TCATAAGTAGGGTAAAAC----CTGTCACATGATGGTCTAATCCCGGCTCATGTTCCCTG 4846 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||| |||| |||| || | |||| |||||||||||| | || ||||||| || Sbjct 4847 TTAGCAGGTGGACAACCCTATGCTTGGTGAATTCTGCTTCACAGTTATGGGAAGAGATGA 4906 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 || |||||||||||||||||| | ||| ||||| ||||| |||||||||||||||||| Sbjct 4907 CACTGAAGGATCAAAAAGCAACATTGCTGTGAACACTTGGATGCCACAAGCCAGTTATCA 4966 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 | | |||||| | |||||| || | ||| | | | | || | | | Sbjct 4967 TCATAGCAACTTTATGGACACCTCCTGCTTAAAACCCCAAAAGCCAGAA-----GTGAAG 5021 Query 271 CCACACTTTCATGGTTTGTATTCA 294 ||||||||||||||| || ||||| Sbjct 5022 CCACACTTTCATGGTCTGCATTCA 5045 >seq150563 Length=447 Score = 141 bits (156), Expect = 2e-31 Identities = 116/141 (82%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 153 TCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCT 212 ||||||||||||||||| ||||||||||||||||||||||||||| ||| |||||||| | Sbjct 447 TCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCTGCCACGAGCTAGTTATCCGT 388 Query 213 GTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCC 272 ||||||||||||||| |||||| || | ||| | | | |||||||| ||||| Sbjct 387 GTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGGCC 328 Query 273 ACACTTTCATGGTTTGTATTC 293 | |||||| ||| ||||||| Sbjct 327 CCGCTTTCACGGTCTGTATTC 307 >seq95945 Length=1289 Score = 118 bits (130), Expect = 2e-24 Identities = 142/196 (72%), Gaps = 28/196 (14%) Strand=Plus/Plus Query 39 AGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGG 98 ||||||||| ||||| |||||| ||| | |||||||| ||||| ||||| | || || Sbjct 183 AGGGTAAAAGTAACCGGTCTCACGACAGCCTAAACCCCGCTCATACTCCCTCTCGGTAGG 242 Query 99 TGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAG 158 ||||||||| || |||||| | ||||||| || ||| ||| Sbjct 243 TGAACAATCTAA--------------TGCTTC---ACAATAGGAACAGAT--CATTAAAG 283 Query 159 GATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTA 218 |||||||||||||||| |||||||| ||||||||||||| || ||||||||| Sbjct 284 GATCAAAAAGCAACGTTGCTATGAAAGCTTGGCTGCCAC---------ATGCCTGTGGTA 334 Query 219 ACTTTTCTGGCACCTC 234 ||||||||| ||||| Sbjct 335 ACTTTTCTGATACCTC 350 >seq106394 Length=780 Score = 91.5 bits (100), Expect = 3e-16 Identities = 101/132 (77%), Gaps = 2/132 (2%) Strand=Plus/Plus Query 158 GGATCAAAAAGCAACGTCGCTATGAACGC-TTGGCTGCCACAAGCCAGTTATCCCTGTGG 216 |||||| ||||| ||||||||||| |||| ||||| |||||||| ||||| ||||||||| Sbjct 162 GGATCAGAAAGCGACGTCGCTATGCACGCTTTGGCCGCCACAAG-CAGTTGTCCCTGTGG 220 Query 217 TAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACAC 276 ||||| |||| | ||| || |||| ||| | | ||||| || ||||| ||| Sbjct 221 GAACTTCTCTGACGGCTCCTGCTTCAACCCCCGAAAGCCACAAGGACCGCGAGGCCCCAC 280 Query 277 TTTCATGGTTTG 288 | ||| ||| || Sbjct 281 TCTCACGGTCTG 292 >seq7982 Length=26399 Score = 87.8 bits (96), Expect = 3e-15 Identities = 64/73 (88%), Gaps = 1/73 (1%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| | ||||||||| || | ||||||||||||||||||| || Sbjct 19124 TCATCAGTAGGGTAAAACCAGCCTGTCTCACAACAGCCTAAACCCAGCTCACGTTCTCTG 19065 Query 91 TTAGT-GGGTGAA 102 ||||| ||||||| Sbjct 19064 TTAGTGGGGTGAA 19052 >seq65606 Length=19674 Score = 82.4 bits (90), Expect = 1e-13 Identities = 56/62 (90%), Gaps = 1/62 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||| ||||||||||||||||||||||| | ||| |||||||||||| |||||| Sbjct 17778 TCATCAGTAAGGTAAAACTAACCTGTCTCATGATGATCT-AACCCAGCTCACATTCCCTT 17836 Query 91 TT 92 || Sbjct 17837 TT 17838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 852836670144