Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Amazona_20vittata_20[genbank_20GCA_5F000332375.1_202013-01-22] 182,974 sequences; 1,175,404,042 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq72142 77.0 5e-12 seq152104 73.4 6e-11 >seq72142 Length=18322 Score = 77.0 bits (84), Expect = 5e-12 Identities = 85/111 (77%), Gaps = 2/111 (2%) Strand=Plus/Plus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||||| | ||||| | ||| | || | ||||||| || || | Sbjct 18121 GTACGAGAGGAACCGCAGT-TTCAGGCCCCT-GGTGTGTGTGCTTGTCTGAGGAGCCACT 18178 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAA 111 | ||| | | |||||||||| || ||||| |||||| |||||||||||||| Sbjct 18179 GGCGCAAGGGTACCATCTGCGGGCTTATGACTGAACACCTCTAAGTCAGAA 18229 >seq152104 Length=471 Score = 73.4 bits (80), Expect = 6e-11 Identities = 86/114 (75%), Gaps = 2/114 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 |||||||||||||| | | |||||| | ||| |||| || |||| || || | Sbjct 454 GTACGAGAGGAACCACAGG-TTCAGACCCCT-GGTGCGTGCGATTGGCTGAGGAGCCACT 397 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCC 114 | ||||| ||||| ||||| | ||||| |||||||||||||| ||||||||| Sbjct 396 GGCGCGAGGCTACTGTCTGCGTGCTTATGACTGAACGCCTCTAAATCAGAATCC 343 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 817747918336