Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26]
78,488 sequences; 1,105,052,351 total letters
Query= AAMG01000190.1
Length=117
Score E
Sequences producing significant alignments: (Bits) Value
seq352 98.7 6e-19
seq51459 75.2 6e-12
>seq352
Length=3900964
Score = 98.7 bits (108), Expect = 6e-19
Identities = 92/117 (79%), Gaps = 0/117 (0%)
Strand=Plus/Plus
Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60
|||||||||||||| | |||| || || |||| ||| |||| ||||| ||||
Sbjct 1505285 GAACCCAAAGACTTGGGTTTCCCGGGAGCTGCCCGGCGGGTCATGGGAATAACGCCGCCG 1505344
Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117
|||| | ||||||||| ||||| ||| |||||||||||||||||||||||||||
Sbjct 1505345 GATCGCGAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGATCGTCTTCGA 1505401
>seq51459
Length=211
Score = 75.2 bits (82), Expect = 6e-12
Identities = 58/69 (84%), Gaps = 0/69 (0%)
Strand=Plus/Plus
Query 49 ATAACATCGCCCGATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGAT 108
||||| |||| |||| | ||||||||| ||||| ||| ||||||||||||||||||
Sbjct 15 ATAACGCCGCCGGATCGCGAGTCGGCATCGTTTATGGTCGGAACTACGACGGTATCTGAT 74
Query 109 CGTCTTCGA 117
|||||||||
Sbjct 75 CGTCTTCGA 83
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 278195146320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |