Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20platyrhynchos_20[refseq_20GCF_5F000355885.1_202013-04-26] 78,488 sequences; 1,105,052,351 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq2906 91.5 6e-13 >seq2906 Length=25778 Score = 91.5 bits (100), Expect = 6e-13 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 351147 GGTTGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACC 351206 |||||| || || |||| | | || || ||||| ||||||||| |||| |||||| Sbjct 24973 GGTTGAGGCGGAAGGTGGACCAGGGCAGGATGCGC---ACGCGGTGCCCCATCATGGACA 25029 Query 351207 CGTTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCT 351266 ||||| ||||||||||| || ||| ||||| |||||| || || | || ||||| || Sbjct 25030 TCTTGTGCAGCGTGGGCTGCCGGTTGAAGATGACGATGTCCCCGTCACACATGTGCCGCT 25089 Query 351267 CCACCT 351272 |||||| Sbjct 25090 CCACCT 25095 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2082591595489424