Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= AAMG01000185.1 Length=266 Score E Sequences producing significant alignments: (Bits) Value seq6360 387 2e-105 seq689 140 5e-31 >seq6360 Length=4227 Score = 387 bits (428), Expect = 2e-105 Identities = 243/257 (95%), Gaps = 4/257 (2%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 ||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| | Sbjct 2914 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 2857 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119 |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 2856 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATT 2797 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 |||||| |||||||||||||| ||| |||||||| |||||||||||||||||||||||| Sbjct 2796 ACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGGATACATCAGTGTAGCGCGCGTGCG 2737 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAA 239 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2736 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGCCTAAAC 2677 Query 240 GGCCAT-CTCCCTCGAA 255 |||||| |||||| || Sbjct 2676 GGCCATAGTCCCTCTAA 2660 >seq689 Length=287272 Score = 140 bits (154), Expect = 5e-31 Identities = 176/234 (75%), Gaps = 6/234 (3%) Strand=Plus/Minus Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60 |||||||||| |||||| || |||| | ||||| ||||| | | |||||| |||||| | Sbjct 277416 GTACAAAGGGGAGGGAC-TAC-CAACACAAGCTT-ATGACCCACACTTACTGGGAATT-C 277361 Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGA-TGAAATTTCAAAGATT 119 ||| || | | |||||||||||| | |||||| |||| | || ||| | || || Sbjct 277360 CTCCTTCATGGGGAACAATTGCAATCCCCGATCCCCCTCACCAATGGGGTTTAACAGGTT 277301 Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179 ||||| ||||| | || ||| | | || | ||| |||||||||||||| ||| Sbjct 277300 ACCCGCACCTGCCAGCAGAGGGTAGACACAAGCTGAGCCACTCAGTGTAGCGCGCATGCA 277241 Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233 |||| |||||||||||||||||| |||||||||||| ||||| || ||||| Sbjct 277240 GCCCGAAACATCTAAGGGCATCACTGACCTGTTATTG-CTCAATCTCAGGTGGC 277188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 751853651635