Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq6360 242 7e-62 seq689 187 5e-45 >seq6360 Length=4227 Score = 242 bits (268), Expect = 7e-62 Identities = 203/245 (83%), Gaps = 3/245 (1%) Strand=Plus/Plus Query 75 TTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTTTGCTC-GAATACATTAGCATGGA 133 |||||||||| ||||||||||| |||||||| ||| | |||| | |||||||||||||| Sbjct 2023 TTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGG 2082 Query 134 ATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAA 193 |||| | |||||| | |||| ||||| |||||| | ||| || ||||||||||| Sbjct 2083 ATAACATCATAGGAT-TCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAA 2141 Query 194 TAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGA 253 |||||| ||||||||| | ||||| || |||||||||||||||||||||||||| | Sbjct 2142 TAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAA 2201 Query 254 AGACTAACTACTGCGAAAGCGTTCACCAAGGATGTTTTCATTAATCAGTGAACGAAAGTT 313 |||| ||| ||||||||||| || |||||||||||||||||||||| ||||||||||| Sbjct 2202 AGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCA-AGAACGAAAGTT 2260 Query 314 AGGGG 318 |||| Sbjct 2261 GGGGG 2265 >seq689 Length=287272 Score = 187 bits (206), Expect = 5e-45 Identities = 210/276 (76%), Gaps = 4/276 (1%) Strand=Plus/Plus Query 39 ATGCCCTTCACTGGGTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGT 97 |||| ||| | || |||| ||| || ||| | | | |||||||||||||||||||||||| Sbjct 276490 ATGCTCTTAAGTGAGTGTCCCGCGGGGCCTGAAGCGTTTACTTTGAAAAAATTAGAGTGT 276549 Query 98 TCAAAGCAGGCCTT-TGCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTT 156 ||||||||||| ||| |||||| ||| |||||||| ||||||||| | ||||| Sbjct 276550 TCAAAGCAGGCTGGCTGCCGGAATACTGCAGCTAGGAATAATGGAATAGGAC-TCCGGTT 276608 Query 157 CTATTTTGTTGGTTTCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGT 216 ||||||||||||||| | | | || | |||||||| ||||| | ||||| | || Sbjct 276609 CTATTTTGTTGGTTTTTGGAAACGGGGCCATGATTAAGAGGGACGGCTGGGGGCATTCGT 276668 Query 217 ATTCAATTGTCAGAGGTGAAATTCTTGGATTTATTGAAGACTAACTACTGCGAAAGCGTT 276 ||| | |||||||||||||||||| ||||| ||||| |||||||| || Sbjct 276669 ATTGTGCCGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACGAACTAAAGCGAAAGCATT 276728 Query 277 CACCAAGGATGTTTTCATTAATCAGTGAACGAAAGT 312 | ||| |||||||||||||||| |||||||||| Sbjct 276729 TGCGAAGAATGTTTTCATTAATCA-AGAACGAAAGT 276763 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 915016145472