Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq6360 304 2e-80 seq689 233 3e-59 >seq6360 Length=4227 Score = 304 bits (336), Expect = 2e-80 Identities = 225/260 (87%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60 |||||| ||| | | ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2770 TACTCGTTGGATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 2711 Query 61 ACCTGTTATTGCCTCAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGC 120 ||||||||||||||||||||||| | | || | | | |||||||||||||||||| | | Sbjct 2710 ACCTGTTATTGCCTCAAACTTCCGTGGCCTAAACGGCCATAGTCCCTCTAAGAAGCTAAC 2651 Query 121 CACCAACC-ATAG-TCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAAT 178 || | || | || |||| |||||||| | ||||||||||||||| |||||| Sbjct 2650 TACGGAGGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAAT 2591 Query 179 TAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 238 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2590 TAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAA 2531 Query 239 GAAAGAGCTATCAATCTGTC 258 ||||||||| ||| |||||| Sbjct 2530 GAAAGAGCTCTCAGTCTGTC 2511 >seq689 Length=287272 Score = 233 bits (258), Expect = 3e-59 Identities = 203/248 (82%), Gaps = 8/248 (3%) Strand=Plus/Minus Query 16 TCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTC 75 |||||||||||||| ||| |||| |||||||||||||||||| ||||||||||||| || Sbjct 277259 TCAGTGTAGCGCGCATGCAGCCCGAAACATCTAAGGGCATCACTGACCTGTTATTGC-TC 277201 Query 76 AAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCAT----- 130 || || | |||||| | |||| | |||||||||||||| | | || ||| Sbjct 277200 AATCT-CAGGTGGCTGAACGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACCGCTCGGC 277142 Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 |||| ||| ||| |||||| | | ||||||||| |||| ||||||||||||||||| Sbjct 277141 AGTC-ATGTAACTAGTTAGCATGCCAGAGTCTCGTTCATTATAGGAATTAACCAGACAAA 277083 Query 191 TCACTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATC 250 |||||||||||||||||||| |||||||||||||||||| ||||| |||||||||| || Sbjct 277082 TCACTCCACCAACTAAGAACAGCCATGCACCACCACCCACGGAATCGAGAAAGAGCTCTC 277023 Query 251 AATCTGTC 258 |||||||| Sbjct 277022 AATCTGTC 277015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796644933009