Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= AAMG01000941.1 Length=299 Score E Sequences producing significant alignments: (Bits) Value seq848 340 3e-91 seq306 279 9e-73 seq75 242 6e-62 seq37 206 5e-51 seq110 205 2e-50 seq13 156 7e-36 seq35 154 3e-35 seq70 152 9e-35 seq79 149 1e-33 seq71 147 4e-33 seq231 145 1e-32 seq130 89.7 9e-16 seq408 75.2 2e-11 >seq848 Length=212736 Score = 340 bits (376), Expect = 3e-91 Identities = 233/263 (89%), Gaps = 0/263 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 105759 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 105700 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 105699 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 105640 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210 ||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| Sbjct 105639 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCC 105580 Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270 ||||||||||||||||| |||||| || | ||| | | | |||||||| ||| Sbjct 105579 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGCGAGG 105520 Query 271 CCACACTTTCATGGTTTGTATTC 293 || | |||||| ||| ||||||| Sbjct 105519 CCCCGCTTTCACGGTCTGTATTC 105497 >seq306 Length=1002924 Score = 279 bits (308), Expect = 9e-73 Identities = 171/182 (94%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 53 CTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 112 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 682883 CTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTATTAGTGGGTGAACAATCCAACG 682824 Query 113 CTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCAAC 172 ||| |||||||||||| |||||||||||||||||||||||||||||||||||| || Sbjct 682823 CTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGACATCGAAGGATCAAAAAGCGAC 682764 Query 173 GTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGGCACC 232 || |||||||||||||||| ||||||||||||||||||||||||||||||||||| |||| Sbjct 682763 GTTGCTATGAACGCTTGGCCGCCACAAGCCAGTTATCCCTGTGGTAACTTTTCTGACACC 682704 Query 233 TC 234 || Sbjct 682703 TC 682702 >seq75 Length=3243839 Score = 242 bits (268), Expect = 6e-62 Identities = 207/255 (81%), Gaps = 4/255 (2%) Strand=Plus/Minus Query 44 AAAACTAACCTGTCTCATGACGG----TCTAAACCCAGCTCACGTTCCCTATTAGTGGGT 99 ||||||||||||||||| |||| ||||| ||||||||| ||||||||||| ||||| Sbjct 1859680 AAAACTAACCTGTCTCACAACGGACAGTCTAATCCCAGCTCATGTTCCCTATTAATGGGT 1859621 Query 100 GAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGACATCGAAGG 159 ||||||||||| |||| |||||||||||| ||||||| |||||||||||| ||||| Sbjct 1859620 GAACAATCCAATGCTTGGTGAATTCTGCTTCACAATGATAGAAAGAGCCGACATTGAAGG 1859561 Query 160 ATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCCTGTGGTAA 219 |||||||||| | ||| |||||||| |||| |||||||||||||||||||||||||| Sbjct 1859560 ATCAAAAAGCGATGTCACTATGAACATGTGGCCACCACAAGCCAGTTATCCCTGTGGTAA 1859501 Query 220 CTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGCCACACTTT 279 |||||||| |||||| || | ||| | | | ||||||| ||||| |||||| Sbjct 1859500 CTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGTCAGAAGGATCACAAGGCCCCACTTT 1859441 Query 280 CATGGTTTGTATTCA 294 || || |||||||| Sbjct 1859440 CACAGTCTGTATTCA 1859426 >seq37 Length=4788929 Score = 206 bits (228), Expect = 5e-51 Identities = 138/154 (90%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||| |||||||||||| |||||||||| |||||||||||||||||| Sbjct 1841350 TCATCAGTAGGGTAAAATTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTA 1841291 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||| |||||||||||||||| |||||||||||| |||||||||||||| | Sbjct 1841290 TTAGTGGGAGAACAATCCAACGCTTGGTGAATTCTGCTTCACAGTGATAGGAAGAGCCTA 1841231 Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAAC 184 ||| | ||||||||||||| |||| ||||||||| Sbjct 1841230 CATTGTAGGATCAAAAAGCGACGTTGCTATGAAC 1841197 >seq110 Length=2575155 Score = 205 bits (226), Expect = 2e-50 Identities = 124/131 (95%), Gaps = 0/131 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 2310964 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 2311023 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 ||||||||||||||||||||||||| |||||||||||| ||||||||||||||||| Sbjct 2311024 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 2311083 Query 151 CATCGAAGGAT 161 ||||||||||| Sbjct 2311084 CATCGAAGGAT 2311094 >seq13 Length=7332498 Score = 156 bits (172), Expect = 7e-36 Identities = 101/111 (91%), Gaps = 0/111 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||| |||||||| ||||||||||||||||||| |||||||| Sbjct 5949868 TCATCAGTAGGGTAAAACTAATCTGTCTCACAACGGTCTAAACCCAGCTCATGTTCCCTA 5949809 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGG 141 ||||||||||||||||||||||||| |||||||||||| |||||||| Sbjct 5949808 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGG 5949758 >seq35 Length=4879238 Score = 154 bits (170), Expect = 3e-35 Identities = 91/95 (96%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct 4821718 TCATCAGTAGGGTAAAACTAACCTGTCTCATGATGGTCTAAACCCAGCTCACGTTCCCTA 4821777 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCT 125 ||||||||||||||||||||||||| ||||||| Sbjct 4821778 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCT 4821812 Score = 118 bits (130), Expect = 2e-24 Identities = 159/216 (74%), Gaps = 8/216 (4%) Strand=Plus/Plus Query 30 GTCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89 |||||||| | | |||| |||| ||||||||| | ||||||||||||||||||||| | Sbjct 2895534 GTCATCAGGAAGATAAACCTAATGTGTCTCATGGCAGTCTAAACCCAGCTCACGTTCATT 2895593 Query 90 ATTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGT-ATGATAGGAAGAGCC 148 |||| |||||||| ||| | || | || ||||| ||| || ||| | ||| | | Sbjct 2895594 GTTAGAGGGTGAACTGCCCAGCACTCAGTGACTTCTG-TTCTGTGGTGACACGAAAATCT 2895652 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTAT 208 |||||| ||||| ||| || | ||| ||| |||| ||||| || | || || | Sbjct 2895653 GACATCCAAGGACTGAAA--TAAGTTTGCT---AACACTTGACTGCCTCAGGGCA-TTTT 2895706 Query 209 CCCTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244 | ||||||||||||||||| || | || || | ||| Sbjct 2895707 CTCTGTGGTAACTTTTCTGACATCACTTGCTTAAAA 2895742 >seq70 Length=4440366 Score = 152 bits (168), Expect = 9e-35 Identities = 117/138 (85%), Gaps = 3/138 (2%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 ||||||| |||||||||||||||||||||||||||| ||||| ||||| ||||||| || Sbjct 1907095 TCATCAGCAGGGTAAAACTAACCTGTCTCATGACGGCATAAACACAGCTGACGTTCCTTA 1907154 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150 |||||||||||| ||||||| |||| ||||| |||| |||||||||||||| | Sbjct 1907155 TTAGTGGGTGAAAAATCCAAAGCTTGTTGAATT---CTTCACAGTGATAGGAAGAGCCAA 1907211 Query 151 CATCGAAGGATCAAAAAG 168 ||| |||| ||||||||| Sbjct 1907212 CATTGAAGCATCAAAAAG 1907229 >seq79 Length=3198580 Score = 149 bits (164), Expect = 1e-33 Identities = 126/154 (82%), Gaps = 1/154 (1%) Strand=Plus/Plus Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 || |||||||||||||||| |||| |||||||||||| |||||||||||||| ||| Sbjct 2568807 TAATGGGTGAACAATCCAATGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGAC 2568866 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 | ||| | ||| || | |||||| |||||| |||| || | ||||||||||||||||| Sbjct 2568867 ACGGAAAGGTCACAATGTGACGTCGTTATGAATGCTTTGCCGTCACAAGCCAGTTATCCC 2568926 Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAAT 245 ||||||||| |||||| |||||| || | |||| Sbjct 2568927 TGTGGTAAC-TTTCTGACACCTCCTGCTTAAAAT 2568959 >seq71 Length=3476439 Score = 147 bits (162), Expect = 4e-33 Identities = 132/163 (81%), Gaps = 6/163 (4%) Strand=Plus/Plus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||||||| |||||| | |||||| |||||| |||||||| | Sbjct 1453356 TCATCAGTAGGGTAAAACTAACTTGTCTCCCATCAGTCTAATCCCAGC--ACGTTCCCCA 1453413 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTG--CTTCGGTATGATAGGAAGAGCC 148 ||||||| |||| |||||||||||| |||| ||| || | ||| || ||||| | Sbjct 1453414 TTAGTGGTTGAATAATCCAACGCTTGGTGAATCCTGTCCTAC--AATGGAAGTAAGAGAC 1453471 Query 149 GACATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGC 191 ||||| ||||||||||||||||| ||| |||| ||| |||||| Sbjct 1453472 GACATTGAAGGATCAAAAAGCAATGTCACTATAAACCCTTGGC 1453514 >seq231 Length=1421614 Score = 145 bits (160), Expect = 1e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||| Sbjct 516056 TCATCAGTAGGGCAAAAATGACCTGTCTCATGACACTCTAAACCCAGCTCACGTTCCCTA 515997 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145 |||||||||||| ||||||| ||| |||||||||||| |||||||||||| Sbjct 515996 TTAGTGGGTGAAAAATCCAATACTTGATGAATTCTGCTTCACAATGATAGGAAGA 515942 Score = 145 bits (160), Expect = 1e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||| Sbjct 520778 TCATCAGTAGGGCAAAAATGACCTGTCTCATGACACTCTAAACCCAGCTCACGTTCCCTA 520719 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145 |||||||||||| ||||||| ||| |||||||||||| |||||||||||| Sbjct 520718 TTAGTGGGTGAAAAATCCAATACTTGATGAATTCTGCTTCACAATGATAGGAAGA 520664 Score = 145 bits (160), Expect = 1e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||| Sbjct 520978 TCATCAGTAGGGCAAAAATGACCTGTCTCATGACACTCTAAACCCAGCTCACGTTCCCTA 520919 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145 |||||||||||| ||||||| ||| |||||||||||| |||||||||||| Sbjct 520918 TTAGTGGGTGAAAAATCCAATACTTGATGAATTCTGCTTCACAATGATAGGAAGA 520864 Score = 145 bits (160), Expect = 1e-32 Identities = 101/115 (88%), Gaps = 0/115 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||| |||| | |||||||||||||| |||||||||||||||||||||||| Sbjct 556177 TCATCAGTAGGGCAAAAATGACCTGTCTCATGACACTCTAAACCCAGCTCACGTTCCCTA 556118 Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGA 145 |||||||||||| ||||||| ||| |||||||||||| |||||||||||| Sbjct 556117 TTAGTGGGTGAAAAATCCAATACTTGATGAATTCTGCTTCACAATGATAGGAAGA 556063 >seq130 Length=2262098 Score = 89.7 bits (98), Expect = 9e-16 Identities = 141/200 (71%), Gaps = 9/200 (5%) Strand=Plus/Minus Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91 ||||||||||| || ||||||| |||||| | ||||||| || ||||| | |||| | | Sbjct 1848784 CATCAGTAGGGAAACACTAACCAGTCTCACTATGGTCTAATCCTAGCTCCCATTCCTTGT 1848725 Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151 || ||||||||||||||||| | | | |||| ||| || || || | || | Sbjct 1848724 TATTGGGTGAACAATCCAAC---TGGCAAGTTCTACTTTACAATAAT--GAGAAACCAAT 1848670 Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211 |||| |||||||| || | || || | ||||| | ||||||| || ||| | Sbjct 1848669 GCTGAAGTATCAAAAATCAGCATCACTTT----GCTTGTCCACCACAAGACAAATATTTC 1848614 Query 212 TGTGGTAACTTTTCTGGCAC 231 |||| |||||| || ||| Sbjct 1848613 CATGGTCACTTTTATGACAC 1848594 >seq408 Length=731887 Score = 75.2 bits (82), Expect = 2e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| ||||||||||||| ||| |||||| ||||| | ||| ||| Sbjct 410419 TCATCAGTAGGGTAAAACGAACCTGTCTCATGTCGGACTAAACACAGCTGTCATTCTCTA 410360 Query 91 TTAGTG 96 || || Sbjct 410359 CTACTG 410354 Score = 75.2 bits (82), Expect = 2e-11 Identities = 56/66 (85%), Gaps = 0/66 (0%) Strand=Plus/Minus Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90 |||||||||||||||||| ||||||||||||| ||| |||||| ||||| | ||| ||| Sbjct 414956 TCATCAGTAGGGTAAAACGAACCTGTCTCATGTCGGACTAAACACAGCTGTCATTCTCTA 414897 Query 91 TTAGTG 96 || || Sbjct 414896 CTACTG 414891 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 854228359584