Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anas_20zonorhyncha_20[genbank_20GCA_5F002224875.1_202017-07-25] 20,089 sequences; 1,310,797,575 total letters Query= NC_010671.1 Length=124279 Score E Sequences producing significant alignments: (Bits) Value seq629 129 5e-25 seq534 93.3 3e-14 seq452 91.5 1e-13 >seq629 Length=368953 Score = 129 bits (142), Expect = 5e-25 Identities = 128/162 (79%), Gaps = 4/162 (2%) Strand=Plus/Plus Query 66049 GGTATACTCGACAATTTCGGTGCACAGATTACTGCAGCGTATGGTGCCCAAATTCTGTTG 66108 ||||||||| || ||||| || |||||||| ||||| ||||| ||||||||||| || Sbjct 325330 GGTATACTCCACTATTTCTGTACACAGATTGCTGCATTTGATGGTCCCCAAATTCTGCTG 325389 Query 66109 ATTACTCTTGCGATTGCATGCATCCTTGTACATCATGTACGGAGTGCCGGTCTCAACTTG 66168 ||| ||||| || ||||| | |||||||||| |||||| || || || ||||| || Sbjct 325390 ATTGCTCTTCCGGTTGCAAGAGTCCTTGTACAGCATGTAAGGTGTTCCAGTCTCTGTCTG 325449 Query 66169 GGACTCAATGATGGCGTGCCAAAGAGC-GC-GTGCCTTCACC 66208 ||| || |||||||||| || ||||| || | ||||||||| Sbjct 325450 GGATTCGATGATGGCGTACC--AGAGCTGCTGGGCCTTCACC 325489 Score = 84.2 bits (92), Expect = 2e-11 Identities = 98/130 (75%), Gaps = 2/130 (2%) Strand=Plus/Plus Query 66340 CATAAATAGATCAGGTATCCAGAGGGCGTAGAAGAGATCGCGTGCTCGTTGCTCCTCAAT 66399 ||| || |||||||| |||||||| || |||| || || | || || ||||| || | Sbjct 326976 CATGAAGAGATCAGGAATCCAGAGAGCAAAGAAAAGGTCTCTGGCACGCTGCTCTTCTTT 327035 Query 66400 GCC-GTGATTTTTGCGCAAGTCGAGGAACTCAAAGATGTCGGCATGCCATGGTTCCAGGT 66458 || ||| || || ||||| || |||||||||||||| |||||| || ||||||| Sbjct 327036 CCCAGTG-TTCTTCTTTAAGTCAAGAAACTCAAAGATGTCCAGATGCCAAGGCTCCAGGT 327094 Query 66459 AGATGGCGAA 66468 ||||||| || Sbjct 327095 AGATGGCAAA 327104 >seq534 Length=463462 Score = 93.3 bits (102), Expect = 3e-14 Identities = 93/118 (79%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 61256 TGGAACG-TTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAG 61314 ||| ||| ||| || ||||||||||| | | || || ||||||||||| ||||| ||| Sbjct 276733 TGGCACGCTTTAGC-CAGGAGGTGCAGATCCCAGAAGCTCGTTGTTTCTATGGCTTTCAG 276791 Query 61315 ATTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCA 61372 ||| ||| ||||| || ||||||||||||||||| | || || || || ||||||| Sbjct 276792 ATTCTCATCGAGAACGTTCACTCGGAGATGTACAGCTTGCTTATAGACACTTACATCA 276849 >seq452 Length=654506 Score = 91.5 bits (100), Expect = 1e-13 Identities = 79/98 (81%), Gaps = 0/98 (0%) Strand=Plus/Plus Query 61042 GAGAATCCTCGTCGTTTCGTATTGTTCCCCATCGAGTATGAGGATATTTGGCGCATGTAC 61101 ||||| || || || ||||| ||||||||||| |||| | || || |||| |||||| Sbjct 328691 GAGAACCCCCGCCGCTTCGTCGTGTTCCCCATCCAGTACCACGACATCTGGCAGATGTAC 328750 Query 61102 AAAAAGGCGGAAGCTTCCTTCTGGACGGTGGAGGAGGT 61139 || ||||| || || ||||||||||||| ||||||||| Sbjct 328751 AAGAAGGCCGAGGCGTCCTTCTGGACGGCGGAGGAGGT 328788 Score = 84.2 bits (92), Expect = 2e-11 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 61256 TGGAACGTTTCGCGCAGGAGGTGCAAGTGTCGGAGGCGCGTTGTTTCTACGGCTTCCAGA 61315 |||| || ||| || || || ||| | | || || ||||||||||| |||||||||| Sbjct 329563 TGGAGCGGTTCAGTCAAGAAGTACAAATCACAGAAGCTCGTTGTTTCTATGGCTTCCAGA 329622 Query 61316 TTGCCATGGAGAATGTCCACTCGGAGATGTACAGTGTTCTCATCGATACGTACATCAGGG 61375 | |||||||| || | || || || ||||| || |||| || || |||||||||| || Sbjct 329623 TCGCCATGGAAAACATACATTCAGAAATGTATAGCCTTCTGATTGACACGTACATCAAGG 329682 Query 61376 A 61376 | Sbjct 329683 A 329683 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397470661562960