Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015-
04-08] 7,593 sequences; 1,119,151,626 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq78 158 2e-36
seq38 113 7e-23
>seq78
Length=4337882
Score = 158 bits (174), Expect = 2e-36
Identities = 95/100 (95%), Gaps = 0/100 (0%)
Strand=Plus/Plus
Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 3149279 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 3149338
Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||||||||||| ||||| |||||||||| ||||||||||
Sbjct 3149339 ACCACCACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 3149378
>seq38
Length=6732988
Score = 113 bits (124), Expect = 7e-23
Identities = 143/191 (75%), Gaps = 7/191 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||| ||| |||| ||||||| ||||||||| | |||||||||||||||| |
Sbjct 5086506 GTCAGTGTAACGCTTGTGCAGCCCAGA-CATCTAAGGATAATACAGACCTGTTATTGC-T 5086449
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133
||| || | | | || | || | |||||||||||||| || || |||||| | |
Sbjct 5086448 CAATCT-CAGGTAGATGAACATCACTTGTCCCTCTAAGAAGTTAGACATCAACCACTTGA 5086390
Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
|| ||| ||| || | || | ||||| || |||| |||||||||||||||||
Sbjct 5086389 GGAATGGGTAACTAGTTCATATGTCAGAGTCTCATTTATTATTGGAATTAACCAGACAAA 5086330
Query 191 TCACTCCACCA 201
|||||||||||
Sbjct 5086329 TCACTCCACCA 5086319
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796741389633
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |