Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= AAMG01000911.1 Length=280 Score E Sequences producing significant alignments: (Bits) Value seq78 158 2e-36 seq38 113 7e-23 >seq78 Length=4337882 Score = 158 bits (174), Expect = 2e-36 Identities = 95/100 (95%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 159 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCACTCCACCAACTAAGAACGGCCATGC 218 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 3149279 GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC 3149338 Query 219 ACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258 ||||||||||| ||||| |||||||||| |||||||||| Sbjct 3149339 ACCACCACCCACGGAATCGAGAAAGAGCTCTCAATCTGTC 3149378 >seq38 Length=6732988 Score = 113 bits (124), Expect = 7e-23 Identities = 143/191 (75%), Gaps = 7/191 (4%) Strand=Plus/Minus Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74 ||||||||| ||| |||| ||||||| ||||||||| | |||||||||||||||| | Sbjct 5086506 GTCAGTGTAACGCTTGTGCAGCCCAGA-CATCTAAGGATAATACAGACCTGTTATTGC-T 5086449 Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA-TAGT 133 ||| || | | | || | || | |||||||||||||| || || |||||| | | Sbjct 5086448 CAATCT-CAGGTAGATGAACATCACTTGTCCCTCTAAGAAGTTAGACATCAACCACTTGA 5086390 Query 134 CGATGGGG---CTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190 || ||| ||| || | || | ||||| || |||| ||||||||||||||||| Sbjct 5086389 GGAATGGGTAACTAGTTCATATGTCAGAGTCTCATTTATTATTGGAATTAACCAGACAAA 5086330 Query 191 TCACTCCACCA 201 ||||||||||| Sbjct 5086329 TCACTCCACCA 5086319 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 796741389633