Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anser_20cygnoides_20domesticus_20[refseq_20GCF_5F000971095.1_202015- 04-08] 7,593 sequences; 1,119,151,626 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq498 113 2e-19 >seq498 Length=60077 Score = 113 bits (124), Expect = 2e-19 Identities = 104/132 (79%), Gaps = 0/132 (0%) Strand=Plus/Plus Query 349084 CTCCTTGAGTCTGGGCATGCCCAGGGTCACGTTCTTGGCCGCGACGCCGGCAAAGTGGAA 349143 ||||||||| | |||| |||||| |||||||||||||||| |||||||| ||||||| Sbjct 405 CTCCTTGAGGCGCGGCACGCCCAGCGTCACGTTCTTGGCCGACACGCCGGCGTAGTGGAA 464 Query 349144 GGTCTGGAGGGTCAACTGCGTGAGGGGCTCGCCGATGCACTGGCCCGCGAGGATGCCTAC 349203 ||| | |||||||| ||||||| |||||||| | |||| |||| || || || Sbjct 465 GGTGTTGAGGGTCATCTGCGTGGCCGGCTCGCCCAGAGACTGCGCCGCCAGCGCCCCCAC 524 Query 349204 CATCTCGCCGGG 349215 |||||| ||||| Sbjct 525 CATCTCCCCGGG 536 Score = 91.5 bits (100), Expect = 6e-13 Identities = 96/126 (76%), Gaps = 3/126 (2%) Strand=Plus/Plus Query 351147 GGTTGATGCCGATGGTGTAGCCCCGCGGGTTGCGCCTCACGCGGTGCACCATGATGGACC 351206 |||||| || || |||| | | || || ||||| ||||||||| |||| |||||| Sbjct 12348 GGTTGAGGCGGAAGGTGGACCAGGGCAGGATGCGC---ACGCGGTGCCCCATCATGGACA 12404 Query 351207 CGTTGTGGAGCGTGGGCTGGCGATTGTGGATGATGATGTCGCCATCGCGCAAGTGCCTCT 351266 ||||| ||||||||||| || ||| ||||| |||||| || || | || ||||| || Sbjct 12405 TCTTGTGCAGCGTGGGCTGCCGGTTGAAGATGACGATGTCCCCGTCACACATGTGCCGCT 12464 Query 351267 CCACCT 351272 |||||| Sbjct 12465 CCACCT 12470 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084531438800214