Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= AAMG01000185.1
Length=266
Score E
Sequences producing significant alignments: (Bits) Value
seq57259 338 9e-91
seq26706 143 4e-32
seq19560 91.5 2e-16
>seq57259
Length=218
Score = 338 bits (374), Expect = 9e-91
Identities = 208/218 (95%), Gaps = 3/218 (1%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
Sbjct 216 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCT-GATGACTCGCGCTTACTAGGCATT-C 159
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCA-AAGATT 119
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 158 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCCCAAGATT 99
Query 120 ACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCG 179
|||||| |||||||||||||| ||| |||||||| ||||||||||||||||||||||||
Sbjct 98 ACCCGGGCCTGTCGGCCAAGGCTATATACTCGTTGGATACATCAGTGTAGCGCGCGTGCG 39
Query 180 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
||||||||||||||||||||||||||||||||||||||
Sbjct 38 GCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 1
>seq26706
Length=23907
Score = 143 bits (158), Expect = 4e-32
Identities = 170/223 (76%), Gaps = 13/223 (6%)
Strand=Plus/Minus
Query 1 GTACAAAGGGCAGGGACGTAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTC 60
||||||| ||||||| | || ||||||||||||| ||||| | | ||||| |||||| |
Sbjct 5067 GTACAAACGGCAGGGGCTTAATCAACGCGAGCTT-ATGACCCACACTTACGGGGAATT-C 5010
Query 61 CTCGTTGAAGACCAACAATTGCAATGATCTATCCCCATCACGATGAAAT----TTCAAAG 116
|||||| | | || ||||||||| | ||||||||||| |||| ||||| |
Sbjct 5009 CTCGTTCACGGGGAAGAATTGCAATCCCCGATCCCCATCAC----AAATGGGGTTCAACG 4954
Query 117 A-TTACCCGGACCTGTCGGCCAAGGTGATAGACTCGTTGAATACA-TCAGTGTAGCGCGC 174
||||||| |||| |||| ||| | || | ||| ||| |||||||||||| |
Sbjct 4953 GGTTACCCGTGCCTGCCGGCGGAGGGTAGGCACAAGCTGAG-ACAGTCAGTGTAGCGCAC 4895
Query 175 GTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGC 217
|| ||||| | |||||||||||||||||||||||||||||||
Sbjct 4894 ATGTGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTGC 4852
>seq19560
Length=34830
Score = 91.5 bits (100), Expect = 2e-16
Identities = 153/216 (71%), Gaps = 4/216 (2%)
Strand=Plus/Minus
Query 19 TAGTCAACGCGAGCTTGATGACTCGCGCTTACTAGGAATTTCCTCGTTGAAGACCAACAA 78
|| |||| |||||||| ||||| | | || ||| |||||| |||| || | | || ||
Sbjct 25062 TAATCAATGCGAGCTT-ATGACCCACACTGACTGGGAATT-CCTCATTCACGGGGAAGAA 25005
Query 79 TTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGA-TTACCCGGACCTGTCGGCCA 137
||||||| |||||||||| || ||||| | ||||| | ||||| ||
Sbjct 25004 TTGCAATCCCAGATCCCCATCATGAATGGGGTTCAATGGGTTACCTGCACCTGCTGGTGG 24945
Query 138 AGGTGATAGACTCGTTGAATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGG 197
||| | || | ||| ||||||||| |||| || ||||| | ||||| |||||
Sbjct 24944 AGGGTAGGCACAAGCTGAGCCAGTCAGTGTAGTGCGCATGTGGCCCCGGACATCCAAGGG 24885
Query 198 CATCACAGACCTGTTATTGCCTCAAACTTCCGTGGC 233
|| |||||||||||||||| ||||| || |||||
Sbjct 24884 CACCACAGACCTGTTATTG-CTCAATCTCGGGTGGC 24850
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 751489161230
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |