Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= AAMG01000278.1 Length=318 Score E Sequences producing significant alignments: (Bits) Value seq37907 120 6e-25 >seq37907 Length=20298 Score = 120 bits (132), Expect = 6e-25 Identities = 146/195 (75%), Gaps = 3/195 (2%) Strand=Plus/Plus Query 53 GTGTGCCGGGGAGCCAGGA-CTTTTACTTTGAAAAAATTAGAGTGTTCAAAGCAGGCCTT 111 |||| ||| || ||| | | | |||||||||| |||||| |||||||||||||||||| Sbjct 4994 GTGTCCCGCGGGGCCCGAAGCATTTACTTTGAGAAAATTCGAGTGTTCAAAGCAGGCCGG 5053 Query 112 T-GCTCGAATACATTAGCATGGAATAATAGAATAGGACGTGCGGTTCTATTTTGTTGGTT 170 ||| | | || ||| ||||||| ||||||||| | ||||||| ||||||||||| Sbjct 5054 CCGCTGGCACACTGCAGCTGTGAATAATGGAATAGGAC-TCCGGTTCTGTTTTGTTGGTT 5112 Query 171 TCTAGGACCGCCGTAATGATTAATAGGGATAGTCGGGGGTGTCAGTATTCAATTGTCAGA 230 | || | || | |||||||| |||||| | |||||| | ||||| | ||| Sbjct 5113 TTCAGAAACGGGGCCATGATTAAGAGGGATGGCCGGGGGCATTCGTATTGTGCCGCTAGA 5172 Query 231 GGTGAAATTCTTGGA 245 |||||||||| |||| Sbjct 5173 GGTGAAATTCCTGGA 5187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 914558243456