Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq64591 156 2e-35
seq15466 78.8 4e-12
>seq64591
Length=522
Score = 156 bits (172), Expect = 2e-35
Identities = 139/174 (80%), Gaps = 0/174 (0%)
Strand=Plus/Plus
Query 26 GAAGCTCCTTCGACGAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTC 85
|| || || || |||||||| |||||||||||||||||| | || ||| |||||| | |
Sbjct 297 GAGGCGCCGTCAACGAGTCGGGTTGTTTGGGAATGCAGCCCAAATCGGGCGGTAAACTCC 356
Query 86 TTCTAAAGCTAAATATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGA 145
|| || |||||||| ||| |||||||||||||| ||||||| | || |||||||||
Sbjct 357 GTCCAAGGCTAAATACAGGCGAGAGACCGATAGCGAACAAGTACCGCGAGGGAAAGATGA 416
Query 146 AAAGCACTTTGGAAAGAGAGTTAAAAAGCACGTGAAATTGTTGAAAGGGAAGCG 199
|||| |||||| ||||||||| ||| || | |||||||| | |||||||||
Sbjct 417 AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGCCGGGAGGGAAGCG 470
>seq15466
Length=42471
Score = 78.8 bits (86), Expect = 4e-12
Identities = 86/115 (75%), Gaps = 7/115 (6%)
Strand=Plus/Plus
Query 40 GAGTCGAGTTGTTTGGGAATGCAGCTCTAAATGGGAGGTAAATTTCTTCTAAAGCTAAAT 99
|||||| |||| ||||||||||||| | || ||| || ||| | | ||||| |||||||
Sbjct 2179 GAGTCGGGTTGCTTGGGAATGCAGCCCAAAGCGGGGGGGAAACTCCATCTAAGGCTAAAT 2238
Query 100 ATTGGCCAGAGACCGATAGCGCACAAGTAGAGTGATCGAAAGATGAAAAGCACTT 154
| ||||||||||| ||||||| || | ||||| ||||||| ||||
Sbjct 2239 -------AAAGACCGATAGCCAACAAGTACCGTAAGGGAAAGCTGAAAAGAACTT 2286
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2078495883100
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |