Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= AAMG01000911.1
Length=280
Score E
Sequences producing significant alignments: (Bits) Value
seq26706 168 1e-39
seq57259 113 7e-23
seq19560 102 1e-19
seq51442 77.0 5e-12
>seq26706
Length=23907
Score = 168 bits (186), Expect = 1e-39
Identities = 165/210 (79%), Gaps = 6/210 (3%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
||||||||||||| | || ||||| | |||||||||||||||||||||||||||||| ||
Sbjct 4909 GTCAGTGTAGCGCACATGTGGCCCCGGACATCTAAGGGCATCACAGACCTGTTATTG-CT 4851
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAAC----CAT 130
| | | || |||||| | |||| | |||||||||||||| | | || || ||
Sbjct 4850 CCATC-TCGGGTGGCTGAATGCCACTTGTCCCTCTAAGAAGTTGGACGCCGACTGCTCAG 4792
Query 131 AGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAAA 190
| | | | | |||||| | | ||||| ||||||||||||||||||||||||||
Sbjct 4791 GGGTCACGTAACGAGTTAGCATGCCAGAGTCTCATTCGTTATCGGAATTAACCAGACAAA 4732
Query 191 TCACTCCACCAACTAAGAACGGCCATGCAC 220
| |||||||||||||||||||||||||||
Sbjct 4731 TTGCTCCACCAACTAAGAACGGCCATGCAC 4702
>seq57259
Length=218
Score = 113 bits (124), Expect = 7e-23
Identities = 68/72 (94%), Gaps = 0/72 (0%)
Strand=Plus/Minus
Query 1 TACTCGGTGGCTCCGTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 60
|||||| ||| | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 72 TACTCGTTGGATACATCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAG 13
Query 61 ACCTGTTATTGC 72
||||||||||||
Sbjct 12 ACCTGTTATTGC 1
>seq19560
Length=34830
Score = 102 bits (112), Expect = 1e-19
Identities = 133/180 (74%), Gaps = 8/180 (4%)
Strand=Plus/Minus
Query 15 GTCAGTGTAGCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCT 74
|||||||||| |||| || ||||| | ||||| ||||||| |||||||||||||||| ||
Sbjct 24922 GTCAGTGTAGTGCGCATGTGGCCCCGGACATCCAAGGGCACCACAGACCTGTTATTG-CT 24864
Query 75 CAAACTTCCATTGGCTGGAAGCCAATAGTCCCTCTAAGAAGCCAGCCACCAACCA----- 129
||| | || ||||| | |||| | ||||||||||||| | || ||||
Sbjct 24863 CAATC-TCGGGTGGCTCAATGCCACTTATCCCTCTAAGAAGTTGGATGCCGACCACTCGG 24805
Query 130 TAGTCGATGGGGCTATTTAGCAGGTTAAGGTCTCGTTCGTTATCGGAATTAACCAGACAA 189
|||| | | ||| |||||| | | ||||||||| ||||| ||||||| |||| ||
Sbjct 24804 GAGTC-ACGTAACTACTTAGCATGCCAGAGTCTCGTTCATTATCAGAATTAATCAGATAA 24746
>seq51442
Length=24262
Score = 77.0 bits (84), Expect = 5e-12
Identities = 53/60 (88%), Gaps = 0/60 (0%)
Strand=Plus/Plus
Query 199 CCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTATCAATCTGTC 258
||| ||||||| ||||||| |||| |||| | ||||||||||||||||| ||||||||||
Sbjct 6746 CCAGCTAAGAATGGCCATGAACCATCACCGACAGAATCAAGAAAGAGCTCTCAATCTGTC 6805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 796258728282
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |