Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= AAMG01000941.1
Length=299
Score E
Sequences producing significant alignments: (Bits) Value
seq36839 316 3e-84
seq21109 306 6e-81
seq36099 288 2e-75
seq36116 194 3e-47
seq44554 165 1e-38
seq39458 141 2e-31
seq44528 102 1e-19
seq43593 93.3 7e-17
seq23811 93.3 7e-17
seq36093 91.5 3e-16
seq64500 73.4 7e-11
>seq36839
Length=55180
Score = 316 bits (350), Expect = 3e-84
Identities = 228/263 (87%), Gaps = 0/263 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||| ||||||| |||||||||| |||||||| | |||||||
Sbjct 33700 TCATCAGTAGGGTAAAACTAACTTGTCTCACGACGGTCTAAGCCCAGCTCGCATTCCCTA 33759
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 33760 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 33819
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||| |
Sbjct 33820 CATCGAAGGATCAAAAAGCGACGTCGCTATGAACGCTTGGCCGCCACAAGCCAGTTATGC 33879
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGG 270
||||||||||||||||| |||||| || | ||| | | | |||||||| |||
Sbjct 33880 CTGTGGTAACTTTTCTGACACCTCCTGCTTAAAACCCAAAAAGCCAGAAGGATCGTGAGG 33939
Query 271 CCACACTTTCATGGTTTGTATTC 293
|| | |||||| ||| |||||||
Sbjct 33940 CCCCGCTTTCACGGTCTGTATTC 33962
>seq21109
Length=113394
Score = 306 bits (338), Expect = 6e-81
Identities = 196/214 (92%), Gaps = 0/214 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 68246 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTA 68187
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||| |||||||||||| |||||||||||||| ||
Sbjct 68186 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCTGA 68127
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
||||||||||||||||||| |||| |||||||||||||||| ||||| ||||||||||||
Sbjct 68126 CATCGAAGGATCAAAAAGCGACGTTGCTATGAACGCTTGGCCGCCACTAGCCAGTTATCC 68067
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244
||||||||||||||||| || ||| ||| | |||
Sbjct 68066 CTGTGGTAACTTTTCTGACATCTCCAGCTTAAAA 68033
>seq36099
Length=52152
Score = 288 bits (318), Expect = 2e-75
Identities = 221/262 (84%), Gaps = 0/262 (0%)
Strand=Plus/Plus
Query 32 CATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTAT 91
|| || | ||||||||||||||||||||| || | ||||||||||||||||| ||||| |
Sbjct 149 CAGCACTGGGGTAAAACTAACCTGTCTCACGATGATCTAAACCCAGCTCACGATCCCTGT 208
Query 92 TAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGAC 151
|||||||||||||||||||||||| |||||||||||| || ||||||||||||||
Sbjct 209 TAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAGTGGTAGGAAGAGCCGAC 268
Query 152 ATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCCC 211
|||||||||||||||||| |||||||||||||| |||||| |||||||||| |||||||
Sbjct 269 ATCGAAGGATCAAAAAGCGACGTCGCTATGAACACTTGGCCACCACAAGCCACTTATCCC 328
Query 212 TGTGGTAACTTTTCTGGCACCTCTAGCCTCAAATTTCGAGGGACTAAAGGATCGATAGGC 271
|||||||||||||||| |||||| || ||||| | | | | ||||||| ||||
Sbjct 329 TGTGGTAACTTTTCTGACACCTCCTGCTTCAAACCCCAAAAGCCAGGAGGATCGTGAGGC 388
Query 272 CACACTTTCATGGTTTGTATTC 293
| | |||||| ||| |||||||
Sbjct 389 CCCGCTTTCACGGTCTGTATTC 410
>seq36116
Length=108936
Score = 194 bits (214), Expect = 3e-47
Identities = 119/127 (94%), Gaps = 0/127 (0%)
Strand=Plus/Plus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 74222 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 74281
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct 74282 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGATAGGAAGAGCCGA 74341
Query 151 CATCGAA 157
||| |||
Sbjct 74342 CATTGAA 74348
>seq44554
Length=64715
Score = 165 bits (182), Expect = 1e-38
Identities = 107/116 (92%), Gaps = 1/116 (1%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 41401 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCTA 41342
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAG 146
||||||||||||||||||||||||| |||||||||||| |||| ||| ||||
Sbjct 41341 TTAGTGGGTGAACAATCCAACGCTTGGTGAATTCTGCTTCACAATGA-AGGGAGAG 41287
>seq39458
Length=13334
Score = 141 bits (156), Expect = 2e-31
Identities = 81/83 (98%), Gaps = 0/83 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||
Sbjct 6609 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAATCCCAGCTCACGTTCCCTA 6550
Query 91 TTAGTGGGTGAACAATCCAACGC 113
|||||||||||||||||||||||
Sbjct 6549 TTAGTGGGTGAACAATCCAACGC 6527
>seq44528
Length=96378
Score = 102 bits (112), Expect = 1e-19
Identities = 58/59 (98%), Gaps = 0/59 (0%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCT 89
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 35286 TCATCAGTAGGGTAAAACTAACCTGTCTCACGACGGTCTAAACCCAGCTCACGTTCCCT 35228
>seq43593
Length=17758
Score = 93.3 bits (102), Expect = 7e-17
Identities = 67/76 (88%), Gaps = 1/76 (1%)
Strand=Plus/Minus
Query 33 ATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTATT 92
||||||||||||||||||||||||| ||||| ||| | |||||| ||||| |||||||||
Sbjct 17363 ATCAGTAGGGTAAAACTAACCTGTCACATGATGGT-TTAACCCAACTCACATTCCCTATT 17305
Query 93 AGTGGGTGAACAATCC 108
||| || ||||||||
Sbjct 17304 AGTCAGTCAACAATCC 17289
>seq23811
Length=95544
Score = 93.3 bits (102), Expect = 7e-17
Identities = 150/214 (70%), Gaps = 5/214 (2%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||| || ||| | |||||| |||||||| | ||||||| ||| |||| ||| |
Sbjct 40795 TCATTAGGAGGTTGAAACTATTTTGTCTCATAGCAGTCTAAATCCACCTCATGTTTATTG 40736
Query 91 TTAGTGGGTGAACAATCCAACGCTTACCGAATTCTGCTTCGGTATGATAGGAAGAGCCGA 150
||| || | ||| ||||| ||| ||| |||| || | ||| ||||| || | |
Sbjct 40735 TTAATGACTAAACTGACCAACACTTGGTGAACTCTGTTTTGTGGTGACAGGAAAAGACAA 40676
Query 151 CATCGAAGGATCAAAAAGCAACGTCGCTATGAACGCTTGGCTGCCACAAGCCAGTTATCC 210
|||| |||| || | ||| | |||| | ||||| |||||||| | ||| ||
Sbjct 40675 CATCAGTGGATTGAA--GTAACTTTGCTA---ATGCTTGACTGCCACAGGGTGGTTTTCT 40621
Query 211 CTGTGGTAACTTTTCTGGCACCTCTAGCCTCAAA 244
||||||||||||||||| || |||| || | |||
Sbjct 40620 CTGTGGTAACTTTTCTGACATCTCTTGCTTAAAA 40587
>seq36093
Length=27556
Score = 91.5 bits (100), Expect = 3e-16
Identities = 64/72 (89%), Gaps = 1/72 (1%)
Strand=Plus/Minus
Query 31 TCATCAGTAGGGTAAAACTAACCTGTCTCATGACGGTCTAAACCCAGCTCACGTTCCCTA 90
|||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| |||
Sbjct 26208 TCATCAGTAGGGTAAAACTAACCTGTCTCACAACGGTCT-AACGCAGCTCACGTTTGCTA 26150
Query 91 TTAGTGGGTGAA 102
||| |||||||
Sbjct 26149 TTAACGGGTGAA 26138
>seq64500
Length=508
Score = 73.4 bits (80), Expect = 7e-11
Identities = 53/60 (88%), Gaps = 1/60 (2%)
Strand=Plus/Plus
Query 1 TACTAAGCGGAATTACCATTGGGGCGACGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 60
||||| | ||||||| || | |||| |||||||||||||||||||||||||||||||||
Sbjct 449 TACTAGGTTGAATTACTATCGCGGCG-CGGTCATCAGTAGGGTAAAACTAACCTGTCTCA 507
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 853800877632
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |