Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06-
10] 70,122 sequences; 1,119,683,066 total letters
Query= AAMG01002186.1
Length=328
Score E
Sequences producing significant alignments: (Bits) Value
seq57259 275 1e-71
seq26706 158 2e-36
seq19560 109 1e-21
>seq57259
Length=218
Score = 275 bits (304), Expect = 1e-71
Identities = 190/215 (88%), Gaps = 0/215 (0%)
Strand=Plus/Plus
Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGT 60
Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233
| ||||||||| || ||||||||| ||| | ||||||||||| ||| | |||||
Sbjct 61 ATCCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTG 120
Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293
|||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| |||
Sbjct 121 ATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTC 180
Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328
|||||| |||||||| |||||||||||||||||||
Sbjct 181 ATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 215
>seq26706
Length=23907
Score = 158 bits (174), Expect = 2e-36
Identities = 192/258 (74%), Gaps = 3/258 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
|||||||||||||| | ||| | |||| || | | ||| ||||||||||||||||
Sbjct 4811 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATGGAG-CAATAACAGGTCTGTG 4868
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
|||||||||||||| | ||||| || | ||||||||||||| | || | || | |
Sbjct 4869 ATGCCCTTAGATGTCCGGGGCCACATGTGCGCTACACTGACTGTCTCAGCTTGTGCCTAC 4928
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| ||||| ||| |||||| | | || | | | ||| ||||||| | | ||||
Sbjct 4929 CCTCCGCCGGCAGGCACGGGTAACCCGTTGAACCCCATTTGTGATGGGGATCGGGGATTG 4988
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | |||||||||| || ||||| | | ||||| ||| ||||||||||
Sbjct 4989 CAATTCTTCCCCGTGAACGAGGAATTCCCCGTAAGTGTGGGTCATAAGCTCGCGTTGATT 5048
Query 311 ACGTCCCTGCCCTTTGTA 328
| | ||||||| ||||||
Sbjct 5049 AAGCCCCTGCCGTTTGTA 5066
>seq19560
Length=34830
Score = 109 bits (120), Expect = 1e-21
Identities = 171/241 (71%), Gaps = 3/241 (1%)
Strand=Plus/Plus
Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130
||||||||||||| | ||| | |||| || | ||||| ||||||||||||||||
Sbjct 24824 CTTCTTAGAGGGATAAGTGGCATTGAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 24881
Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190
||||||| ||||| | ||||| || |||| |||||||||| | || | || | |
Sbjct 24882 GTGCCCTTGGATGTCCGGGGCCACATGCGCACTACACTGACTGGCTCAGCTTGTGCCTAC 24941
Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250
||| || | |||| ||||| | | || | | || || ||||||| | ||||
Sbjct 24942 CCTCCACCAGCAGGTGCAGGTAACCCATTGAACCCCATTCATGATGGGGATCTGGGATTG 25001
Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310
||||| || | | | || ||||||| || ||| || | | ||||| ||| ||| ||||||
Sbjct 25002 CAATTCTTCCCCGTGAATGAGGAATTCCCAGTCAGTGTGGGTCATAAGCTCGCATTGATT 25061
Query 311 A 311
|
Sbjct 25062 A 25062
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 946535804416
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |