Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Antrostomus_20carolinensis_20[refseq_20GCF_5F000700745.1_202014-06- 10] 70,122 sequences; 1,119,683,066 total letters Query= AAMG01002186.1 Length=328 Score E Sequences producing significant alignments: (Bits) Value seq57259 275 1e-71 seq26706 158 2e-36 seq19560 109 1e-21 >seq57259 Length=218 Score = 275 bits (304), Expect = 1e-71 Identities = 190/215 (88%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 114 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAG 173 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 GCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGT 60 Query 174 AGCCAACGAGTTCATCACCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTG 233 | ||||||||| || ||||||||| ||| | ||||||||||| ||| | ||||| Sbjct 61 ATCCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTG 120 Query 234 CTGGGGATAGAGCATTGCAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTC 293 |||||||||| |||||||||| ||| ||||||||||||||||||||||||||||| ||| Sbjct 121 ATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTC 180 Query 294 ATCAGCACGCGTTGATTACGTCCCTGCCCTTTGTA 328 |||||| |||||||| ||||||||||||||||||| Sbjct 181 ATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTA 215 >seq26706 Length=23907 Score = 158 bits (174), Expect = 2e-36 Identities = 192/258 (74%), Gaps = 3/258 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 |||||||||||||| | ||| | |||| || | | ||| |||||||||||||||| Sbjct 4811 CTTCTTAGAGGGACAAGTGGCATTCAGCCACCCGA-GATGGAG-CAATAACAGGTCTGTG 4868 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 |||||||||||||| | ||||| || | ||||||||||||| | || | || | | Sbjct 4869 ATGCCCTTAGATGTCCGGGGCCACATGTGCGCTACACTGACTGTCTCAGCTTGTGCCTAC 4928 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| ||||| ||| |||||| | | || | | | ||| ||||||| | | |||| Sbjct 4929 CCTCCGCCGGCAGGCACGGGTAACCCGTTGAACCCCATTTGTGATGGGGATCGGGGATTG 4988 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | |||||||||| || ||||| | | ||||| ||| |||||||||| Sbjct 4989 CAATTCTTCCCCGTGAACGAGGAATTCCCCGTAAGTGTGGGTCATAAGCTCGCGTTGATT 5048 Query 311 ACGTCCCTGCCCTTTGTA 328 | | ||||||| |||||| Sbjct 5049 AAGCCCCTGCCGTTTGTA 5066 >seq19560 Length=34830 Score = 109 bits (120), Expect = 1e-21 Identities = 171/241 (71%), Gaps = 3/241 (1%) Strand=Plus/Plus Query 72 CTTCTTAGAGGGACTATCGGC-TCAAGCCGATGGAAGTTTGAGGCAATAACAGGTCTGTG 130 ||||||||||||| | ||| | |||| || | ||||| |||||||||||||||| Sbjct 24824 CTTCTTAGAGGGATAAGTGGCATTGAGCCACCCGA-GATTGAG-CAATAACAGGTCTGTG 24881 Query 131 ATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGACAGAGCCAACGAGTTCATCA 190 ||||||| ||||| | ||||| || |||| |||||||||| | || | || | | Sbjct 24882 GTGCCCTTGGATGTCCGGGGCCACATGCGCACTACACTGACTGGCTCAGCTTGTGCCTAC 24941 Query 191 CCTTGGCCGGAAGGTCTGGGTAATCTTGTTAAACTCTGTCGTGCTGGGGATAGAGCATTG 250 ||| || | |||| ||||| | | || | | || || ||||||| | |||| Sbjct 24942 CCTCCACCAGCAGGTGCAGGTAACCCATTGAACCCCATTCATGATGGGGATCTGGGATTG 25001 Query 251 CAATTATTGCTCTTCAACGAGGAATGCCTAGTAAGCGCGTGTCATCAGCACGCGTTGATT 310 ||||| || | | | || ||||||| || ||| || | | ||||| ||| ||| |||||| Sbjct 25002 CAATTCTTCCCCGTGAATGAGGAATTCCCAGTCAGTGTGGGTCATAAGCTCGCATTGATT 25061 Query 311 A 311 | Sbjct 25062 A 25062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 946535804416